Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11620648	1.00[ASN][1000 genomes]
rs11621596	1.00[ASN][1000 genomes]
rs11627977	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628257	1.00[ASN][1000 genomes]
rs11629219	1.00[ASN][1000 genomes]
rs2110909	0.90[EUR][1000 genomes]
rs2287377	0.89[EUR][1000 genomes]
rs4243654	0.88[EUR][1000 genomes]
rs4903561	0.89[EUR][1000 genomes]
rs60803895	1.00[ASN][1000 genomes]
rs61990332	1.00[ASN][1000 genomes]
rs61991597	1.00[ASN][1000 genomes]
rs61991600	1.00[ASN][1000 genomes]
rs7144771	1.00[ASN][1000 genomes]
rs7147670	1.00[ASN][1000 genomes]
rs8009449	1.00[ASN][1000 genomes]
rs8011512	1.00[ASN][1000 genomes]
rs8017343	1.00[ASN][1000 genomes]
rs8018063	1.00[ASN][1000 genomes]
rs8018183	1.00[ASN][1000 genomes]
rs978607	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv832834	chr14:77554987-77724357	Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77654200-77709400	Weak transcription	Esophagus	oesophagus
2	chr14:77654600-77679400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr14:77671000-77679200	Weak transcription	Brain Germinal Matrix	brain
4	chr14:77671000-77685200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr14:77671000-77686200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr14:77671200-77678600	Weak transcription	Fetal Brain Female	brain
7	chr14:77671200-77679600	Weak transcription	Brain Angular Gyrus	brain
8	chr14:77673600-77683400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr14:77674600-77685400	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr14:77674800-77686400	Weak transcription	Brain Substantia Nigra	brain
11	chr14:77675000-77679200	Weak transcription	Brain Anterior Caudate	brain
12	chr14:77675200-77678800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr14:77675400-77678200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr14:77675400-77679000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr14:77675400-77679600	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr14:77676800-77679400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr14:77677600-77679000	Weak transcription	Spleen	Spleen

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