Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10506249	0.89[AFR][1000 genomes]
rs11182504	0.82[AFR][1000 genomes]
rs11610751	0.96[EUR][1000 genomes]
rs11611513	0.92[EUR][1000 genomes]
rs11612006	0.96[EUR][1000 genomes]
rs11613516	0.92[EUR][1000 genomes]
rs12297783	0.89[AFR][1000 genomes]
rs1353144	0.92[EUR][1000 genomes]
rs17094591	0.91[EUR][1000 genomes]
rs17094614	0.92[EUR][1000 genomes]
rs17094655	0.96[EUR][1000 genomes]
rs1817884	0.96[EUR][1000 genomes]
rs1873977	0.92[EUR][1000 genomes]
rs1873979	0.92[EUR][1000 genomes]
rs55636254	0.91[EUR][1000 genomes]
rs55670411	0.85[AFR][1000 genomes]
rs56367710	0.92[EUR][1000 genomes]
rs57180808	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58635872	0.84[AFR][1000 genomes]
rs7304503	0.96[EUR][1000 genomes]
rs73092522	0.92[EUR][1000 genomes]
rs73092524	0.92[EUR][1000 genomes]
rs7309287	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73094350	0.92[EUR][1000 genomes]
rs73094362	0.91[EUR][1000 genomes]
rs73094373	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs765530	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs869629	0.91[EUR][1000 genomes]
rs9971755	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049818	chr12:44486312-45133783	Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44840600-44842600	Weak transcription	HepG2	liver
2	chr12:44840600-44848200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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