Variant report

Variant	rs11186761
Chromosome Location	chr10:93705832-93705833
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs1059515	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10881997	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10881998	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10881999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882000	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882001	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882002	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882003	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882004	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882005	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882006	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882007	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10882009	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882010	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882012	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10882014	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10882015	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10882016	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186749	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186751	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186753	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11186764	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186771	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11186774	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11186780	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11186783	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11186792	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11186805	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11186806	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11527871	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12220586	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12358429	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12358865	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12359037	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1589066	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1589067	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17362257	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1914345	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2421808	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61185306	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61876491	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61876492	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8181288	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93684600-93719600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:93685000-93706200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr10:93685000-93717800	Weak transcription	Small Intestine	intestine
4	chr10:93685800-93735200	Weak transcription	Fetal Heart	heart
5	chr10:93688800-93711400	Weak transcription	Fetal Brain Male	brain
6	chr10:93689200-93719200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr10:93690000-93709600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr10:93690800-93742400	Weak transcription	Stomach Mucosa	stomach
9	chr10:93691000-93709600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr10:93691800-93707400	Strong transcription	Dnd41	blood
11	chr10:93691800-93716600	Weak transcription	NHLF	lung
12	chr10:93691800-93741400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr10:93692000-93711400	Weak transcription	Brain Hippocampus Middle	brain
14	chr10:93695000-93707000	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr10:93696400-93711200	Weak transcription	Colon Smooth Muscle	Colon
16	chr10:93696600-93711200	Weak transcription	Brain Angular Gyrus	brain
17	chr10:93696600-93713200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr10:93696800-93708600	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr10:93696800-93711200	Weak transcription	Brain Cingulate Gyrus	brain
20	chr10:93696800-93711200	Weak transcription	K562	blood
21	chr10:93696800-93711400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr10:93696800-93711600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr10:93696800-93712000	Weak transcription	Psoas Muscle	Psoas
24	chr10:93696800-93712000	Weak transcription	Right Ventricle	heart
25	chr10:93696800-93712200	Weak transcription	Aorta	Aorta
26	chr10:93696800-93712800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr10:93696800-93715000	Weak transcription	Placenta Amnion	Placenta Amnion
28	chr10:93696800-93716400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr10:93696800-93735600	Weak transcription	Pancreas	Pancrea
30	chr10:93697000-93717000	Weak transcription	Brain Substantia Nigra	brain
31	chr10:93697000-93718000	Weak transcription	Spleen	Spleen
32	chr10:93697000-93735600	Weak transcription	Esophagus	oesophagus
33	chr10:93697200-93711200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
34	chr10:93697200-93711800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr10:93697200-93712200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr10:93697200-93718400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr10:93697400-93711000	Weak transcription	HSMMtube	muscle
38	chr10:93697800-93748800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
39	chr10:93698000-93711800	Weak transcription	A549	lung
40	chr10:93699600-93706400	Strong transcription	HUES6 Cell Line	embryonic stem cell
41	chr10:93699600-93706600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr10:93699600-93750600	Strong transcription	Primary monocytes fromperipheralblood	blood
43	chr10:93700000-93708800	Weak transcription	Pancreatic Islets	Pancreatic Islet
44	chr10:93700400-93706000	Strong transcription	Fetal Intestine Large	intestine
45	chr10:93700400-93707400	Strong transcription	HUES64 Cell Line	embryonic stem cell
46	chr10:93700600-93706000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr10:93700600-93707600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
48	chr10:93700800-93707200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr10:93700800-93717800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr10:93701000-93709400	Strong transcription	Primary T helper cells fromperipheralblood	blood

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