Variant report

Variant	rs11204279
Chromosome Location	chr10:48586280-48586281
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10888204	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11204275	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12218639	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1452290	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1584730	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1584731	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2257629	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2790957	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4147455	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4336968	0.87[EUR][1000 genomes]
rs4489675	0.81[EUR][1000 genomes]
rs4922523	0.82[EUR][1000 genomes]
rs57691103	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61442046	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61843447	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs786773	0.84[ASN][1000 genomes]
rs786776	0.88[ASN][1000 genomes]
rs786777	0.98[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48575600-48598200	Weak transcription	NH-A	brain
2	chr10:48584600-48588200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr10:48585600-48586600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:48585600-48586600	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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