Variant report

Variant	rs61442046
Chromosome Location	chr10:48561809-48561810
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10888204	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11204275	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11204279	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12218639	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1452290	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1584730	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1584731	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2257629	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2790957	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4147455	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4306241	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4489675	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57691103	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58376504	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs61843411	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61843412	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61843447	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72642126	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs786773	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs786776	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs786777	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs786792	0.81[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48540800-48562800	Weak transcription	Right Atrium	heart
2	chr10:48551800-48563200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:48557200-48562600	Weak transcription	Stomach Smooth Muscle	stomach
4	chr10:48558200-48562600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:48560200-48563800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:48560600-48562400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr10:48560600-48563600	Enhancers	NHDF-Ad	bronchial
8	chr10:48560800-48565200	Enhancers	Fetal Lung	lung
9	chr10:48561000-48563200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:48561000-48564200	Enhancers	Fetal Stomach	stomach
11	chr10:48561200-48562400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr10:48561400-48562200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:48561400-48562400	Weak transcription	NHLF	lung

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