Variant report

Variant	rs72642126
Chromosome Location	chr10:48557340-48557341
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10888204	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11204275	0.90[EUR][1000 genomes]
rs12218639	0.81[EUR][1000 genomes]
rs1452290	0.89[EUR][1000 genomes]
rs1584731	0.91[EUR][1000 genomes]
rs4306241	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4336968	0.85[EUR][1000 genomes]
rs4489675	0.93[EUR][1000 genomes]
rs57691103	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58376504	0.91[EUR][1000 genomes]
rs61442046	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61843411	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61843412	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs786776	0.81[EUR][1000 genomes]
rs786777	0.83[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48540800-48562800	Weak transcription	Right Atrium	heart
2	chr10:48544000-48557400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:48551800-48563200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr10:48555200-48557400	Enhancers	HepG2	liver
5	chr10:48555800-48560200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:48556200-48557600	Weak transcription	Fetal Stomach	stomach
7	chr10:48556800-48558200	Enhancers	Pancreas	Pancrea
8	chr10:48557000-48560800	Weak transcription	Fetal Lung	lung
9	chr10:48557000-48561400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:48557200-48557400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr10:48557200-48562600	Weak transcription	Stomach Smooth Muscle	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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