Variant report

Variant	rs61843447
Chromosome Location	chr10:48570043-48570044
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10888204	0.94[ASN][1000 genomes]
rs11204275	0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11204279	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12218639	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1452290	0.93[ASN][1000 genomes]
rs1584730	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1584731	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2257629	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2790957	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4147455	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4336968	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4489675	0.80[EUR][1000 genomes]
rs57691103	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61442046	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61843412	0.84[ASN][1000 genomes]
rs786776	0.82[ASN][1000 genomes]
rs786777	0.92[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:48562800-48571200	Weak transcription	NHLF	lung
2	chr10:48565600-48571000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr10:48569800-48571000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:48569800-48571000	Weak transcription	Adipose Nuclei	Adipose
5	chr10:48569800-48571200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr10:48569800-48571200	Weak transcription	Fetal Lung	lung
7	chr10:48570000-48571000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr10:48570000-48571200	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr10:48570000-48571400	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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