The 2.0 version of rSNPBase

Variant report

Variant rs11206825
Chromosome Location chr1:56944045-56944046
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56942600-56944800 Enhancers Spleen Spleen
2 chr1:56943400-56944200 Enhancers Fetal Brain Male brain
3 chr1:56943600-56944200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:56943600-56944600 Enhancers Lung lung
5 chr1:56943800-56944200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:56943800-56944200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:56943800-56944200 Enhancers Brain Angular Gyrus brain
8 chr1:56943800-56944200 Enhancers Brain Cingulate Gyrus brain
9 chr1:56943800-56944200 Enhancers Brain Inferior Temporal Lobe brain
10 chr1:56943800-56944200 Enhancers Brain Substantia Nigra brain
11 chr1:56943800-56944200 Enhancers NHLF lung
12 chr1:56943800-56944400 Enhancers Primary neutrophils fromperipheralblood blood
13 chr1:56943800-56944400 Bivalent Enhancer Primary B cells from cord blood blood
14 chr1:56943800-56944400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:56943800-56944400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:56943800-56944400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
17 chr1:56943800-56944400 Enhancers Colonic Mucosa Colon
18 chr1:56943800-56944400 Enhancers Fetal Lung lung
19 chr1:56943800-56944400 Enhancers Fetal Muscle Trunk muscle
20 chr1:56943800-56944400 Enhancers Fetal Muscle Leg muscle
21 chr1:56943800-56944400 Enhancers Ovary ovary
22 chr1:56943800-56944400 Enhancers Right Atrium heart
23 chr1:56943800-56944400 Enhancers Skeletal Muscle Male skeletal muscle
24 chr1:56943800-56944400 Enhancers Stomach Smooth Muscle stomach
25 chr1:56943800-56944400 Enhancers NHDF-Ad bronchial
26 chr1:56943800-56944600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:56943800-56944600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:56943800-56944600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr1:56943800-56944600 Enhancers Cortex derived primary cultured neurospheres brain
30 chr1:56943800-56944600 Enhancers Liver Liver
31 chr1:56943800-56944600 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr1:56943800-56944800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:56943800-56944800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:56943800-56944800 Enhancers Fetal Kidney kidney
35 chr1:56943800-56944800 Enhancers Left Ventricle heart
36 chr1:56943800-56944800 Enhancers Pancreas Pancrea
37 chr1:56943800-56944800 Enhancers Right Ventricle heart
38 chr1:56943800-56945000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
39 chr1:56943800-56945200 Bivalent Enhancer Primary monocytes fromperipheralblood blood
40 chr1:56943800-56945200 Enhancers Placenta Placenta
41 chr1:56943800-56948200 Weak transcription HUVEC blood vessel
42 chr1:56943800-56957000 Weak transcription HSMM muscle
43 chr1:56943800-56957200 Weak transcription Psoas Muscle Psoas
44 chr1:56943800-56957400 Weak transcription Fetal Intestine Small intestine
45 chr1:56943800-56957600 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:56943800-56959400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr1:56944000-56944200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
48 chr1:56944000-56944200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:56944000-56944200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:56944000-56944400 Enhancers HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015