Variant report

Variant	rs11217527
Chromosome Location	chr11:119697584-119697585
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10892472	0.92[ASN][1000 genomes]
rs10892474	0.92[ASN][1000 genomes]
rs11217524	1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1447149	0.92[ASN][1000 genomes]
rs2084291	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7125270	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11217527	MPZL3	cis	cerebellum	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119688000-119697600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:119688200-119702800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr11:119690800-119698000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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