Variant report

Variant rs11234927
Chromosome Location chr11:86757459-86757460
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86749600-86758200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:86749600-86766800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:86750000-86765800 Weak transcription Placenta Placenta
4 chr11:86750400-86760600 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr11:86750600-86757600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr11:86750600-86757800 Weak transcription H9 Cell Line embryonic stem cell
7 chr11:86750600-86757800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr11:86750600-86757800 Weak transcription Fetal Intestine Large intestine
9 chr11:86750600-86759800 Weak transcription Fetal Thymus thymus
10 chr11:86750600-86760600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr11:86750800-86757800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr11:86750800-86758600 Weak transcription HSMM muscle
13 chr11:86750800-86759800 Weak transcription HSMMtube muscle
14 chr11:86750800-86760000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr11:86750800-86760200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr11:86750800-86780600 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr11:86750800-86782000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:86750800-86787400 Weak transcription A549 lung
19 chr11:86751000-86760000 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr11:86751000-86786800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr11:86751000-86787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:86751200-86762600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr11:86751200-86785600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr11:86751400-86758400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr11:86751400-86759800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr11:86751400-86767800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr11:86751400-86786400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr11:86751600-86757800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:86751600-86787000 Weak transcription Aorta Aorta
30 chr11:86752000-86768800 Weak transcription Ovary ovary
31 chr11:86752000-86768800 Weak transcription Psoas Muscle Psoas
32 chr11:86752200-86757600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr11:86752200-86759800 Weak transcription Fetal Brain Male brain
34 chr11:86752200-86768800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr11:86752400-86758200 Weak transcription Brain Cingulate Gyrus brain
36 chr11:86752400-86762400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr11:86753000-86758000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr11:86753200-86758000 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr11:86753400-86760200 Weak transcription Brain Anterior Caudate brain
40 chr11:86753800-86758400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr11:86754200-86758400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr11:86754800-86758200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr11:86754800-86758400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:86754800-86759600 Weak transcription Fetal Muscle Trunk muscle
45 chr11:86755000-86757600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr11:86755000-86758400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr11:86755200-86757800 Weak transcription Dnd41 blood
48 chr11:86755200-86758800 Weak transcription Brain Substantia Nigra brain
49 chr11:86755200-86779000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr11:86755400-86757600 Weak transcription Primary hematopoietic stem cells short term culture blood

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