Variant report

Variant rs11239672
Chromosome Location chr10:43049025-43049026
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:43047000-43049200 Active TSS Fetal Kidney kidney
2 chr10:43047000-43049200 Active TSS A549 lung
3 chr10:43047600-43049200 Active TSS Rectal Mucosa Donor 29 rectum
4 chr10:43047600-43049200 Active TSS NHDF-Ad bronchial
5 chr10:43047800-43049200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr10:43047800-43049200 Active TSS Brain Germinal Matrix brain
7 chr10:43047800-43049200 Active TSS Brain Inferior Temporal Lobe brain
8 chr10:43047800-43049200 Active TSS Duodenum Mucosa Duodenum
9 chr10:43047800-43049200 Active TSS Fetal Brain Female brain
10 chr10:43047800-43049200 Active TSS Rectal Smooth Muscle rectum
11 chr10:43048000-43049200 Active TSS Skeletal Muscle Female skeletal muscle
12 chr10:43048600-43049200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr10:43048600-43049200 Flanking Active TSS Dnd41 blood
14 chr10:43048800-43049200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr10:43048800-43049200 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr10:43048800-43049200 Flanking Active TSS Liver Liver
17 chr10:43048800-43049200 Flanking Active TSS Brain Cingulate Gyrus brain
18 chr10:43048800-43049200 Flanking Active TSS Brain Hippocampus Middle brain
19 chr10:43048800-43049200 Flanking Active TSS Colon Smooth Muscle Colon
20 chr10:43048800-43049200 Enhancers Pancreas Pancrea
21 chr10:43048800-43050800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr10:43048800-43052200 Weak transcription Lung lung
23 chr10:43049000-43049200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr10:43049000-43049200 Enhancers Primary neutrophils fromperipheralblood blood
25 chr10:43049000-43049200 Enhancers Primary B cells from peripheral blood blood
26 chr10:43049000-43049200 Enhancers Primary T helper cells PMA-I stimulated --
27 chr10:43049000-43049200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr10:43049000-43049200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:43049000-43049200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr10:43049000-43049200 Enhancers Adipose Nuclei Adipose
31 chr10:43049000-43049200 Enhancers Fetal Heart heart
32 chr10:43049000-43049200 Enhancers Placenta Placenta
33 chr10:43049000-43049200 Enhancers Fetal Stomach stomach
34 chr10:43049000-43049200 Enhancers Stomach Mucosa stomach
35 chr10:43049000-43049200 Enhancers Stomach Smooth Muscle stomach
36 chr10:43049000-43049200 Flanking Active TSS GM12878-XiMat blood
37 chr10:43049000-43049400 Enhancers Primary T cells fromperipheralblood blood
38 chr10:43049000-43049400 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr10:43049000-43049400 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr10:43049000-43049400 Enhancers Fetal Brain Male brain
41 chr10:43049000-43049400 Enhancers Fetal Muscle Trunk muscle
42 chr10:43049000-43049400 Enhancers Fetal Muscle Leg muscle
43 chr10:43049000-43049400 Enhancers Skeletal Muscle Male skeletal muscle
44 chr10:43049000-43049400 Flanking Active TSS HepG2 liver

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