Variant report

Variant	rs11239670
Chromosome Location	chr10:43048020-43048021
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:170)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:170 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:43047580-43048734	GM18505	blood:	n/a	n/a
2	POLR2A	chr10:43048011-43048666	HepG2	liver:	n/a	n/a
3	HEY1	chr10:43047410-43048408	K562	blood:	n/a	n/a
4	ZNF263	chr10:43046914-43048474	HEK293-T-REx	kidney:	n/a	n/a
5	POLR2A	chr10:43047792-43048706	GM12891	blood:	n/a	n/a
6	POLR2A	chr10:43047690-43048643	K562	blood:	n/a	n/a
7	UBTF	chr10:43047633-43048754	K562	blood:	n/a	n/a
8	CHD2	chr10:43047762-43048589	Hela-S3	cervix:	n/a	n/a
9	POLR2A	chr10:43047558-43048491	MCF-7	breast:	n/a	n/a
10	TBP	chr10:43047925-43048761	HepG2	liver:	n/a	n/a
11	MAX	chr10:43047005-43048774	K562	blood:	n/a	n/a
12	SIX5	chr10:43047987-43048685	A549	lung:	n/a	chr10:43048570-43048579
13	MXI1	chr10:43047576-43048499	H1-hESC	embryonic stem cell:	n/a	n/a
14	MAX	chr10:43047362-43048610	SK-N-SH	brain:	n/a	n/a
15	POLR2A	chr10:43047931-43048642	HEK293	kidney:	n/a	n/a
16	TBP	chr10:43047855-43048630	K562	blood:	n/a	n/a
17	MAX	chr10:43047356-43048854	ECC-1	luminal epithelium:	n/a	n/a
18	SREBP1	chr10:43047449-43048812	GM12878	blood:	n/a	n/a
19	POLR2A	chr10:43047687-43048674	HL-60	blood:	n/a	n/a
20	POLR2A	chr10:43047910-43048572	GM12892	blood:	n/a	n/a
21	POLR2A	chr10:43047877-43048609	H1-neurons	neurons:	n/a	n/a
22	ELF1	chr10:43048018-43048773	MCF-7	breast:	n/a	chr10:43048602-43048613
23	GABPA	chr10:43047790-43048927	MCF-7	breast:	n/a	n/a
24	POLR2A	chr10:43047782-43048501	Gliobla	brain:	n/a	n/a
25	KAP1	chr10:43047250-43048854	HEK293	kidney:	n/a	n/a
26	POLR2A	chr10:43047500-43048675	HL-60	blood:	n/a	n/a
27	ZC3H11A	chr10:43047864-43048411	K562	blood:	n/a	n/a
28	PML	chr10:43048011-43048393	K562	blood:	n/a	n/a
29	POLR2A	chr10:43047675-43048435	Hela-S3	cervix:	n/a	n/a
30	TAF1	chr10:43047875-43048627	H1-hESC	embryonic stem cell:	n/a	n/a
31	REST	chr10:43047462-43048681	H1-neurons	neurons:	n/a	chr10:43048484-43048502
32	POLR2A	chr10:43047735-43048670	K562	blood:	n/a	n/a
33	MAX	chr10:43047498-43048454	A549	lung:	n/a	n/a
34	TEAD4	chr10:43047441-43048483	K562	blood:	n/a	n/a
35	MAX	chr10:43047503-43048516	NB4	blood:	n/a	n/a
36	MAZ	chr10:43048001-43048604	HepG2	liver:	n/a	n/a
37	MTA3	chr10:43047594-43048033	GM12878	blood:	n/a	n/a
38	POLR2A	chr10:43048009-43048524	GM12878	blood:	n/a	n/a
39	RCOR1	chr10:43047830-43048679	Hela-S3	cervix:	n/a	n/a
40	MAX	chr10:43047409-43048544	MCF-7	breast:	n/a	n/a
41	ZNF143	chr10:43047753-43048852	K562	blood:	n/a	chr10:43048570-43048579
42	POLR2A	chr10:43047998-43048593	K562	blood:	n/a	n/a
43	SIN3AK20	chr10:43047979-43048412	HepG2	liver:	n/a	n/a
44	MYC	chr10:43047544-43048195	MCF-7	breast:	n/a	n/a
45	MAX	chr10:43047356-43048073	ECC-1	luminal epithelium:	n/a	n/a
46	HMGN3	chr10:43047554-43048290	K562	blood:	n/a	n/a
47	UBTF	chr10:43047677-43048777	K562	blood:	n/a	n/a
48	POLR2A	chr10:43048017-43048338	H1-hESC	embryonic stem cell:	n/a	n/a
49	MAX	chr10:43047451-43048038	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr10:43047554-43048593	K562	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:43046301..43049301-chr10:43278095..43279962,3	K562	blood:
2	chr10:43043951..43049889-chr10:43132519..43135803,5	K562	blood:
3	chr10:43046145..43048386-chr10:43132522..43135382,4	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF33B-4	chr10:43047025-43048044	NONHSAT012891
2	lnc-ZNF33B-4	chr10:43048018-43048236	NONHSAT012895
3	lnc-ZNF33B-4	chr10:43047025-43048236	NONHSAT012894
4	lnc-ZNF33B-4	chr10:43047836-43048236	NONHSAT012896
5	lnc-ZNF33B-4	chr10:43047021-43048044	NONHSAT012901

No data

Variant related genes	Relation type
FXYD6P1	TF binding region
ENSG00000196693	Chromatin interaction
ENSG00000165733	Chromatin interaction
ENSG00000272373	Chromatin interaction

Extended variants
information (count: 160 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:140)

rs_ID	r²[population]
rs10128322	0.87[CEU][hapmap]
rs10900251	0.86[EUR][1000 genomes]
rs10900253	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs11239616	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11239617	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11239618	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11239639	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11239642	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11239643	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11239644	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11239651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11239653	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11239661	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11239662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11239663	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11239668	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11239669	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11239671	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11239672	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11239675	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11239682	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11239707	0.85[EUR][1000 genomes]
rs11239708	0.82[EUR][1000 genomes]
rs11239709	0.85[EUR][1000 genomes]
rs1136118	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11528468	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11528472	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11528550	0.89[EUR][1000 genomes]
rs11528552	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12217930	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12218051	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12218403	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12218419	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12219232	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12219669	0.82[CHB][hapmap]
rs12221072	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12221408	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12240565	1.00[CEU][hapmap]
rs12242735	0.85[EUR][1000 genomes]
rs12256867	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs12259767	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12261023	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs12261168	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs12262549	0.84[EUR][1000 genomes]
rs12266387	0.85[EUR][1000 genomes]
rs12771775	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1413393	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs158369	0.86[EUR][1000 genomes]
rs158379	0.86[EUR][1000 genomes]
rs158386	0.84[EUR][1000 genomes]
rs1591248	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs17157474	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17343205	0.88[CEU][hapmap]
rs17427443	0.85[CEU][hapmap]
rs17428442	0.87[CEU][hapmap]
rs1831910	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1831916	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1855448	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1855449	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1855451	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2005977	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2005978	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2016696	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs209378	0.86[EUR][1000 genomes]
rs209379	0.84[EUR][1000 genomes]
rs209393	0.82[EUR][1000 genomes]
rs2297693	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs2419368	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs28404481	0.85[EUR][1000 genomes]
rs3740324	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3740325	0.91[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3740326	1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[ASN][1000 genomes]
rs3740327	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3740328	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3758512	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3758513	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4262680	0.84[EUR][1000 genomes]
rs55914715	0.85[EUR][1000 genomes]
rs58635980	0.80[EUR][1000 genomes]
rs58877883	0.85[EUR][1000 genomes]
rs60433789	0.85[EUR][1000 genomes]
rs6593371	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6593413	0.86[EUR][1000 genomes]
rs66635049	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs672073	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs672077	0.81[EUR][1000 genomes]
rs7068874	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7069467	0.94[EUR][1000 genomes]
rs7069663	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7071990	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7074806	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7075245	0.82[CHB][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7076170	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7076534	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7076624	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7076787	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7078390	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7079577	0.96[EUR][1000 genomes]
rs7079581	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7082367	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7082480	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7083254	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7085956	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7097153	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7097299	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7097766	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs7098574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7100856	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73256680	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73256682	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73256699	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73260601	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73262610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73262631	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73266634	0.86[EUR][1000 genomes]
rs74137908	0.85[EUR][1000 genomes]
rs74137911	0.85[EUR][1000 genomes]
rs74137912	0.85[EUR][1000 genomes]
rs74137913	0.85[EUR][1000 genomes]
rs7476198	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7476285	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7899665	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900972	0.85[EUR][1000 genomes]
rs7903632	0.85[EUR][1000 genomes]
rs7904627	0.86[EUR][1000 genomes]
rs7905834	0.88[CEU][hapmap]
rs7910969	0.86[EUR][1000 genomes]
rs7911986	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7912057	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7914365	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7914372	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7916307	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs7917276	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7918447	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7919880	0.86[EUR][1000 genomes]
rs7920292	0.89[CEU][hapmap];0.82[CHB][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7920620	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7921571	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7921658	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9730806	0.85[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817455	chr10:42607635-43151812	Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	nsv550670	chr10:42725663-43089965	Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv550672	chr10:42753190-43441729	Bivalent Enhancer Genic enhancers Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
4	nsv895054	chr10:42761931-43068841	ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv895064	chr10:42783481-43243325	Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
6	nsv466877	chr10:42794125-43066414	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
7	nsv550683	chr10:42794125-43066414	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv533331	chr10:42830221-43356410	ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
9	nsv1042764	chr10:42846383-43511712	Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
10	nsv895071	chr10:42864138-43066414	ZNF genes & repeats Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
11	nsv895073	chr10:42884169-43066505	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
12	nsv1050394	chr10:42890663-43604956	Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
13	nsv540573	chr10:42890663-43604956	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
14	nsv534548	chr10:42890664-43729688	Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
15	nsv469725	chr10:42965130-43178323	Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
16	nsv482513	chr10:42965130-43178323	Weak transcription ZNF genes & repeats Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
17	esv2758216	chr10:42965131-43510191	Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
18	esv2759746	chr10:42965131-43510191	Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
19	nsv8625	chr10:43046814-43052296	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
20	nsv947883	chr10:43047970-43048798	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:43047000-43048200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr10:43047000-43048200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr10:43047000-43048800	Active TSS	iPS-18 Cell Line	embryonic stem cell
4	chr10:43047000-43049000	Active TSS	H9 Cell Line	embryonic stem cell
5	chr10:43047000-43049000	Active TSS	HUES48 Cell Line	embryonic stem cell
6	chr10:43047000-43049000	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr10:43047000-43049200	Active TSS	Fetal Kidney	kidney
8	chr10:43047000-43049200	Active TSS	A549	lung
9	chr10:43047200-43048200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
10	chr10:43047200-43048800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr10:43047200-43048800	Active TSS	NH-A	brain
12	chr10:43047200-43048800	Active TSS	NHLF	lung
13	chr10:43047200-43049000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr10:43047200-43049000	Active TSS	Fetal Intestine Small	intestine
15	chr10:43047200-43049000	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr10:43047400-43048200	Flanking Active TSS	Primary hematopoietic stem cells	blood
17	chr10:43047400-43048200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
18	chr10:43047400-43048800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr10:43047400-43048800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr10:43047400-43049000	Active TSS	ES-I3 Cell Line	embryonic stem cell
21	chr10:43047400-43049000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr10:43047400-43049000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
23	chr10:43047400-43049000	Active TSS	HSMMtube	muscle
24	chr10:43047600-43048400	Active TSS	Spleen	Spleen
25	chr10:43047600-43048600	Active TSS	iPS-15b Cell Line	embryonic stem cell
26	chr10:43047600-43048600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
27	chr10:43047600-43048600	Active TSS	Placenta Amnion	Placenta Amnion
28	chr10:43047600-43048800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr10:43047600-43048800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr10:43047600-43048800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr10:43047600-43048800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr10:43047600-43048800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr10:43047600-43048800	Active TSS	Brain Anterior Caudate	brain
34	chr10:43047600-43048800	Active TSS	Brain Hippocampus Middle	brain
35	chr10:43047600-43048800	Active TSS	Colon Smooth Muscle	Colon
36	chr10:43047600-43048800	Active TSS	Esophagus	oesophagus
37	chr10:43047600-43048800	Active TSS	Gastric	stomach
38	chr10:43047600-43048800	Active TSS	Sigmoid Colon	Sigmoid Colon
39	chr10:43047600-43048800	Active TSS	Small Intestine	intestine
40	chr10:43047600-43048800	Active TSS	HSMM	muscle
41	chr10:43047600-43048800	Active TSS	NHEK	skin
42	chr10:43047600-43049000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr10:43047600-43049000	Active TSS	HUES6 Cell Line	embryonic stem cell
44	chr10:43047600-43049000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr10:43047600-43049000	Active TSS	Primary T helper naive cells from peripheral blood	blood
46	chr10:43047600-43049000	Active TSS	Primary T killer memory cells from peripheral blood	blood
47	chr10:43047600-43049000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr10:43047600-43049000	Active TSS	Aorta	Aorta
49	chr10:43047600-43049000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
50	chr10:43047600-43049000	Active TSS	Brain Substantia Nigra	brain

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