Variant report

Variant	rs1132659
Chromosome Location	chr11:8022889-8022890
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:8007800..8010303-chr11:8022829..8024867,3	MCF-7	breast:
2	chr11:8021034..8023077-chr11:8027438..8029926,2	K562	blood:
3	chr11:8015926..8019399-chr11:8021894..8024855,4	K562	blood:
4	chr11:8017899..8020620-chr11:8022528..8024447,3	K562	blood:

Variant related genes	Relation type
ENSG00000175390	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10839958	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11041706	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12275353	0.83[ASN][1000 genomes]
rs4758038	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6578919	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8010800-8033400	Weak transcription	Right Atrium	heart
2	chr11:8016600-8025600	Weak transcription	Fetal Heart	heart
3	chr11:8017800-8024800	Weak transcription	Esophagus	oesophagus
4	chr11:8018000-8031800	Weak transcription	Aorta	Aorta
5	chr11:8018400-8032000	Weak transcription	Right Ventricle	heart
6	chr11:8019000-8023200	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr11:8019400-8024600	Weak transcription	Fetal Brain Male	brain
8	chr11:8020000-8023000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr11:8020000-8023600	Weak transcription	Brain Hippocampus Middle	brain
10	chr11:8020000-8024200	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr11:8020000-8024400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr11:8020000-8024800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr11:8020000-8028200	Weak transcription	Colon Smooth Muscle	Colon
14	chr11:8020000-8033000	Weak transcription	NHDF-Ad	bronchial
15	chr11:8020200-8023000	Weak transcription	Ovary	ovary
16	chr11:8020200-8023600	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr11:8020200-8023800	Weak transcription	Rectal Smooth Muscle	rectum
18	chr11:8020200-8024200	Weak transcription	NHEK	skin
19	chr11:8020200-8024600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr11:8020200-8025400	Weak transcription	Primary hematopoietic stem cells	blood
21	chr11:8020200-8025400	Weak transcription	Brain Germinal Matrix	brain
22	chr11:8020200-8026600	Weak transcription	Brain Cingulate Gyrus	brain
23	chr11:8020400-8023800	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr11:8020400-8023800	Weak transcription	NH-A	brain
25	chr11:8020600-8023000	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr11:8020600-8023000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr11:8020600-8023000	Weak transcription	HUVEC	blood vessel
28	chr11:8020600-8025200	Weak transcription	HSMMtube	muscle
29	chr11:8020800-8023000	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr11:8020800-8023000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr11:8020800-8023400	Weak transcription	Gastric	stomach
32	chr11:8020800-8024400	Weak transcription	Fetal Intestine Large	intestine
33	chr11:8020800-8024800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr11:8020800-8026400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr11:8021200-8023400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr11:8021200-8023800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr11:8021400-8023200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr11:8021400-8024000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr11:8021400-8024600	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr11:8021400-8024800	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr11:8021600-8023600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr11:8021800-8023800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
43	chr11:8021800-8024000	Weak transcription	Fetal Muscle Trunk	muscle
44	chr11:8021800-8024400	Weak transcription	Fetal Brain Female	brain
45	chr11:8021800-8024400	Weak transcription	Fetal Thymus	thymus
46	chr11:8021800-8024600	Weak transcription	Fetal Stomach	stomach
47	chr11:8021800-8024800	Weak transcription	Fetal Intestine Small	intestine
48	chr11:8022000-8023800	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr11:8022000-8023800	Weak transcription	Lung	lung
50	chr11:8022000-8024000	Weak transcription	HUES6 Cell Line	embryonic stem cell

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