Variant report

Variant rs12275353
Chromosome Location chr11:8010130-8010131
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8008000-8010400 Active TSS Psoas Muscle Psoas
2 chr11:8008200-8010200 Active TSS HUES48 Cell Line embryonic stem cell
3 chr11:8008200-8010200 Active TSS iPS-15b Cell Line embryonic stem cell
4 chr11:8008200-8010200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
5 chr11:8008400-8010200 Active TSS HUES6 Cell Line embryonic stem cell
6 chr11:8008600-8010400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
7 chr11:8008600-8010400 Active TSS NHLF lung
8 chr11:8009200-8010200 Flanking Active TSS Primary T cells from cord blood blood
9 chr11:8009400-8010200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
10 chr11:8009400-8010200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
11 chr11:8009400-8010200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr11:8009400-8010200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr11:8009400-8010200 Flanking Active TSS Brain Hippocampus Middle brain
14 chr11:8009400-8010200 Flanking Active TSS Brain Inferior Temporal Lobe brain
15 chr11:8009400-8010200 Flanking Active TSS Duodenum Mucosa Duodenum
16 chr11:8009400-8010200 Flanking Active TSS Pancreatic Islets Pancreatic Islet
17 chr11:8009400-8010200 Flanking Active TSS Stomach Smooth Muscle stomach
18 chr11:8009400-8010200 Flanking Active TSS HMEC breast
19 chr11:8009400-8010200 Flanking Active TSS Osteobl bone
20 chr11:8009400-8010400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr11:8009400-8010400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr11:8009400-8010400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
23 chr11:8009400-8010400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
24 chr11:8009400-8010400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr11:8009400-8010400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr11:8009400-8010400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
27 chr11:8009400-8010400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
28 chr11:8009400-8010400 Flanking Active TSS Dnd41 blood
29 chr11:8009400-8010600 Flanking Active TSS Rectal Smooth Muscle rectum
30 chr11:8009400-8010800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
31 chr11:8009400-8010800 Flanking Active TSS Fetal Brain Male brain
32 chr11:8009400-8010800 Transcr. at gene 5' and 3' K562 blood
33 chr11:8009400-8013400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:8009600-8010200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr11:8009600-8010200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
36 chr11:8009600-8010200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr11:8009600-8010200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
38 chr11:8009600-8010200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr11:8009600-8010200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:8009600-8010200 Flanking Active TSS Fetal Heart heart
41 chr11:8009600-8010200 Flanking Active TSS NHEK skin
42 chr11:8009600-8010400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:8009600-8010400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr11:8009600-8010400 Flanking Active TSS Brain Germinal Matrix brain
45 chr11:8009600-8010400 Flanking Active TSS HSMMtube muscle
46 chr11:8009600-8010600 Flanking Active TSS Colon Smooth Muscle Colon
47 chr11:8009600-8010600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
48 chr11:8009600-8010600 Enhancers Small Intestine intestine
49 chr11:8009600-8010600 Flanking Active TSS GM12878-XiMat blood
50 chr11:8009600-8010800 Enhancers Primary mononuclear cells fromperipheralblood Blood

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