Variant report

Variant	rs1145880
Chromosome Location	chr6:82366965-82366966
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1145887	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1145889	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12195387	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12208792	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1276879	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1276880	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1276881	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1276882	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1276883	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1322896	0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1417716	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1917065	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2025273	0.83[CHB][hapmap]
rs2027435	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4591906	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4706898	0.83[AMR][1000 genomes]
rs6906526	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6910041	0.92[CEU][hapmap];0.86[CHB][hapmap];0.93[CHD][hapmap];0.83[GIH][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6912820	0.82[AMR][1000 genomes]
rs912029	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9344195	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9344199	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9344202	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9344203	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9344205	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs9350930	0.96[CEU][hapmap];0.86[CHB][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9353018	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9361839	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9443930	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9449346	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82358000-82368000	Weak transcription	Fetal Heart	heart
2	chr6:82361800-82367200	Weak transcription	Left Ventricle	heart

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