Variant report

Variant	rs9344203
Chromosome Location	chr6:82314948-82314949
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1145880	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1145887	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1145889	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12195387	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12208792	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1276879	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1276880	0.82[AMR][1000 genomes]
rs1276881	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1276882	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1276883	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1341226	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1417716	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1917065	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2027435	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4591906	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4706898	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6906526	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6910041	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6912820	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs912029	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9344195	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9344199	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9344202	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9344204	0.82[AMR][1000 genomes]
rs9344205	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9350930	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9353018	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9361839	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9443930	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9449346	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82311000-82315400	Weak transcription	NHDF-Ad	bronchial

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