Variant report

Variant rs11545923
Chromosome Location chr6:35541791-35541792
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35530600-35543200 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr6:35533600-35563800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:35534400-35569000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:35534800-35544600 Weak transcription H1 Cell Line embryonic stem cell
5 chr6:35535000-35554200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:35535000-35564600 Weak transcription H9 Cell Line embryonic stem cell
7 chr6:35535200-35543400 Weak transcription HSMMtube muscle
8 chr6:35536200-35542200 Weak transcription Brain Hippocampus Middle brain
9 chr6:35537000-35543000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr6:35537000-35543200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:35537400-35543000 Weak transcription Fetal Muscle Trunk muscle
12 chr6:35537800-35542000 Weak transcription HUVEC blood vessel
13 chr6:35538200-35545000 Strong transcription Muscle Satellite Cultured Cells --
14 chr6:35538400-35551800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:35538600-35551600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:35538800-35548200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:35539000-35542000 Weak transcription Primary hematopoietic stem cells blood
18 chr6:35539000-35542200 Weak transcription Primary B cells from peripheral blood blood
19 chr6:35539000-35542200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:35539000-35542200 Weak transcription Fetal Muscle Leg muscle
21 chr6:35539000-35542600 Weak transcription Placenta Amnion Placenta Amnion
22 chr6:35539000-35545200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:35539000-35551800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr6:35539000-35551800 Strong transcription Thymus Thymus
25 chr6:35539000-35553400 Weak transcription Osteobl bone
26 chr6:35539200-35542000 Weak transcription Colonic Mucosa Colon
27 chr6:35539200-35542200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr6:35539200-35545000 Strong transcription HSMM muscle
29 chr6:35539200-35546000 Strong transcription HMEC breast
30 chr6:35539200-35548200 Strong transcription Fetal Adrenal Gland Adrenal Gland
31 chr6:35539200-35548200 Strong transcription Sigmoid Colon Sigmoid Colon
32 chr6:35539200-35548400 Strong transcription Stomach Smooth Muscle stomach
33 chr6:35539200-35549600 Strong transcription Left Ventricle heart
34 chr6:35539200-35551000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:35539200-35552000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:35539400-35542400 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:35539400-35545800 Strong transcription Primary T cells from cord blood blood
38 chr6:35539400-35553400 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr6:35539600-35541800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr6:35539600-35545000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:35539800-35545000 Strong transcription Primary T killer naive cells fromperipheralblood blood
42 chr6:35539800-35545000 Strong transcription Brain Anterior Caudate brain
43 chr6:35539800-35545000 Strong transcription Brain Inferior Temporal Lobe brain
44 chr6:35539800-35549400 Strong transcription Fetal Thymus thymus
45 chr6:35539800-35551200 Strong transcription Esophagus oesophagus
46 chr6:35539800-35551800 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr6:35539800-35568400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:35540000-35543200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr6:35540000-35546800 Strong transcription GM12878-XiMat blood
50 chr6:35540000-35550600 Strong transcription Primary neutrophils fromperipheralblood blood

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