The 2.0 version of rSNPBase

Variant report

Variant rs11576665
Chromosome Location chr1:94903792-94903793
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94885200-94907200 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:94885200-94915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:94888200-94905400 Weak transcription Right Atrium heart
4 chr1:94888400-94914600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:94889200-94914200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:94892000-94905000 Weak transcription HMEC breast
7 chr1:94894600-94914800 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:94895400-94904200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:94895600-94904000 Weak transcription Colonic Mucosa Colon
10 chr1:94895600-94905400 Weak transcription Gastric stomach
11 chr1:94895600-94905400 Weak transcription Left Ventricle heart
12 chr1:94895800-94905400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:94899200-94914800 Weak transcription HSMM muscle
14 chr1:94899400-94905000 Weak transcription Pancreas Pancrea
15 chr1:94900600-94903800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:94900600-94903800 Weak transcription Thymus Thymus
17 chr1:94900800-94904400 Weak transcription Rectal Smooth Muscle rectum
18 chr1:94901000-94903800 Weak transcription HepG2 liver
19 chr1:94901200-94903800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:94901800-94911200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:94902400-94904200 Weak transcription Stomach Mucosa stomach
22 chr1:94902800-94904000 Weak transcription Primary T cells from cord blood blood
23 chr1:94902800-94904800 ZNF genes & repeats Primary hematopoietic stem cells blood
24 chr1:94903000-94903800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:94903000-94907800 Weak transcription Primary B cells from cord blood blood
26 chr1:94903200-94904000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:94903200-94904000 Weak transcription Liver Liver
28 chr1:94903200-94904000 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:94903200-94905400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:94903200-94905800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:94903200-94908200 Weak transcription Fetal Kidney kidney
32 chr1:94903400-94903800 Weak transcription Duodenum Mucosa Duodenum
33 chr1:94903400-94904000 Weak transcription Osteobl bone
34 chr1:94903400-94904200 Weak transcription Fetal Thymus thymus
35 chr1:94903400-94904400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:94903400-94904400 Weak transcription A549 lung
37 chr1:94903600-94905400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:94903600-94906000 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015