The 2.0 version of rSNPBase

Variant report

Variant rs4536006
Chromosome Location chr1:94913993-94913994
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94885200-94915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:94888400-94914600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:94889200-94914200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:94894600-94914800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:94899200-94914800 Weak transcription HSMM muscle
6 chr1:94904600-94914800 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:94906200-94914600 Weak transcription Left Ventricle heart
8 chr1:94906200-94915200 Weak transcription Pancreas Pancrea
9 chr1:94908600-94918800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:94909400-94914800 Weak transcription Fetal Kidney kidney
11 chr1:94909600-94914600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:94910000-94914800 Weak transcription Stomach Smooth Muscle stomach
13 chr1:94910400-94914800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:94910600-94928600 Weak transcription A549 lung
15 chr1:94911000-94914200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:94911000-94914400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:94911000-94914800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:94911000-94914800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:94911000-94914800 Weak transcription Gastric stomach
20 chr1:94911200-94914200 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:94911200-94914200 Weak transcription Thymus Thymus
22 chr1:94911200-94914400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:94911400-94914600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:94911600-94914400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:94911600-94914400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:94911600-94914800 Weak transcription Brain Substantia Nigra brain
27 chr1:94911800-94914600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:94911800-94914800 Weak transcription Brain Hippocampus Middle brain
29 chr1:94911800-94915000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:94912000-94914200 Weak transcription Fetal Thymus thymus
31 chr1:94912000-94914400 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:94912000-94914400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:94912000-94914600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:94912200-94914000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:94912400-94915000 Weak transcription Colonic Mucosa Colon
36 chr1:94912400-94915400 Weak transcription HUVEC blood vessel
37 chr1:94912600-94914600 Weak transcription Liver Liver
38 chr1:94913200-94914800 Weak transcription Rectal Smooth Muscle rectum
39 chr1:94913200-94915000 Weak transcription NHDF-Ad bronchial
40 chr1:94913400-94914600 Weak transcription Fetal Stomach stomach
41 chr1:94913400-94914800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:94913400-94914800 Weak transcription Osteobl bone
43 chr1:94913600-94914200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:94913600-94914800 Weak transcription Brain Anterior Caudate brain
45 chr1:94913600-94916000 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:94913800-94914000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:94913800-94914600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:94913800-94914800 Weak transcription Right Ventricle heart
49 chr1:94913800-94974200 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015