The 2.0 version of rSNPBase

Variant report

Variant rs16946
Chromosome Location chr1:94930345-94930346
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94913800-94974200 Weak transcription Psoas Muscle Psoas
2 chr1:94914200-94951800 Weak transcription Brain Angular Gyrus brain
3 chr1:94914800-94985800 Weak transcription NHLF lung
4 chr1:94915400-94930400 Weak transcription Brain Anterior Caudate brain
5 chr1:94915400-94934000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:94915400-94993200 Weak transcription HSMMtube muscle
7 chr1:94915800-94930600 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:94915800-94935000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:94915800-94955400 Weak transcription NHDF-Ad bronchial
10 chr1:94915800-94956600 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:94916000-94932000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:94916000-94941800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:94916000-94957200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr1:94916000-94969600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:94916000-94970000 Weak transcription Ovary ovary
16 chr1:94916000-94970000 Weak transcription Spleen Spleen
17 chr1:94916000-94973800 Weak transcription Pancreas Pancrea
18 chr1:94916000-94993000 Weak transcription Esophagus oesophagus
19 chr1:94916200-94968400 Weak transcription Gastric stomach
20 chr1:94916200-94971600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:94916200-94974200 Weak transcription Lung lung
22 chr1:94917200-94964400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:94917800-94971800 Weak transcription NHEK skin
24 chr1:94917800-95000800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:94918000-94942000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:94918000-94957000 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr1:94918200-94930400 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:94918800-94941600 Weak transcription Primary B cells from peripheral blood blood
29 chr1:94919000-94942800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:94920600-94948400 Weak transcription Small Intestine intestine
31 chr1:94920800-94930400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:94921000-94957800 Weak transcription Brain Germinal Matrix brain
33 chr1:94922400-94930400 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr1:94923000-94932000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:94923200-94942000 Weak transcription Right Ventricle heart
36 chr1:94923600-94956400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:94923600-94956600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr1:94923800-94941800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:94923800-94948000 Weak transcription NH-A brain
40 chr1:94923800-95000400 Weak transcription Aorta Aorta
41 chr1:94924000-94930400 Weak transcription Fetal Muscle Trunk muscle
42 chr1:94924000-94947000 Weak transcription Rectal Smooth Muscle rectum
43 chr1:94924000-94964400 Weak transcription GM12878-XiMat blood
44 chr1:94924400-94930400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:94924800-94968400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:94925000-94930400 Weak transcription Primary T cells fromperipheralblood blood
47 chr1:94925000-94930400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:94925600-94935000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:94925800-94931400 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:94926000-94930400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015