Variant report
| Variant | rs11590554 |
|---|---|
| Chromosome Location | chr1:211810392-211810393 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:211804200-211813400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 2 | chr1:211804200-211816600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr1:211806800-211811600 | Weak transcription | Fetal Intestine Large | intestine |
| 4 | chr1:211806800-211813000 | Weak transcription | Stomach Mucosa | stomach |
| 5 | chr1:211807000-211810600 | Weak transcription | Placenta | Placenta |
| 6 | chr1:211807000-211811600 | Weak transcription | Esophagus | oesophagus |
| 7 | chr1:211807000-211812000 | Weak transcription | Adipose Nuclei | Adipose |
| 8 | chr1:211807000-211816200 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr1:211807000-211816200 | Weak transcription | Ovary | ovary |
| 10 | chr1:211807200-211812000 | Weak transcription | NHLF | lung |
| 11 | chr1:211807200-211816600 | Weak transcription | Right Ventricle | heart |
| 12 | chr1:211807200-211817200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 13 | chr1:211807400-211812200 | Weak transcription | NH-A | brain |
| 14 | chr1:211807400-211816800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr1:211807600-211811600 | Weak transcription | Liver | Liver |
| 16 | chr1:211807600-211812800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr1:211807600-211812800 | Weak transcription | Pancreas | Pancrea |
| 18 | chr1:211807600-211813000 | Weak transcription | HSMMtube | muscle |
| 19 | chr1:211807600-211816600 | Weak transcription | Left Ventricle | heart |
| 20 | chr1:211808600-211810800 | Enhancers | Osteobl | bone |
| 21 | chr1:211808800-211810600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 22 | chr1:211809200-211810400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 23 | chr1:211809400-211810800 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr1:211809400-211810800 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 25 | chr1:211809400-211810800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 26 | chr1:211809400-211811200 | Enhancers | HepG2 | liver |
| 27 | chr1:211809400-211813000 | Enhancers | A549 | lung |
| 28 | chr1:211809600-211811000 | Enhancers | HUVEC | blood vessel |
| 29 | chr1:211809800-211810400 | Enhancers | Hela-S3 | cervix |
| 30 | chr1:211809800-211813000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 31 | chr1:211810000-211810600 | Enhancers | Spleen | Spleen |
| 32 | chr1:211810000-211810800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 33 | chr1:211810000-211811600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 34 | chr1:211810200-211810400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 35 | chr1:211810200-211811400 | Weak transcription | Fetal Intestine Small | intestine |
| 36 | chr1:211810200-211811600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr1:211810200-211812000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr1:211810200-211812000 | Weak transcription | HMEC | breast |
| 39 | chr1:211810200-211812000 | Weak transcription | NHDF-Ad | bronchial |
| 40 | chr1:211810200-211812200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr1:211810200-211813000 | Weak transcription | HSMM | muscle |
