The 2.0 version of rSNPBase

Variant report

Variant rs17017855
Chromosome Location chr1:211816076-211816077
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211804200-211816600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:211807000-211816200 Weak transcription Colonic Mucosa Colon
3 chr1:211807000-211816200 Weak transcription Ovary ovary
4 chr1:211807200-211816600 Weak transcription Right Ventricle heart
5 chr1:211807200-211817200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr1:211807400-211816800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:211807600-211816600 Weak transcription Left Ventricle heart
8 chr1:211810600-211816400 Weak transcription Spleen Spleen
9 chr1:211811400-211829600 Enhancers Fetal Intestine Small intestine
10 chr1:211811600-211828200 Enhancers Fetal Intestine Large intestine
11 chr1:211812400-211816600 Weak transcription Adipose Nuclei Adipose
12 chr1:211812600-211816600 Weak transcription Esophagus oesophagus
13 chr1:211813200-211816200 Weak transcription Pancreas Pancrea
14 chr1:211813200-211816400 Weak transcription HMEC breast
15 chr1:211813200-211816600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr1:211813200-211817000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:211813400-211816400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:211813600-211816200 Enhancers HepG2 liver
19 chr1:211813600-211816600 Weak transcription Placenta Placenta
20 chr1:211813600-211817200 Weak transcription HSMM muscle
21 chr1:211813600-211821600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:211813800-211816200 Weak transcription Stomach Mucosa stomach
23 chr1:211813800-211816400 Weak transcription A549 lung
24 chr1:211813800-211816600 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:211813800-211816800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:211813800-211817000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:211813800-211822600 Weak transcription NHDF-Ad bronchial
28 chr1:211814000-211816400 Weak transcription Fetal Heart heart
29 chr1:211814000-211816800 Weak transcription HUVEC blood vessel
30 chr1:211814000-211817000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:211814000-211817000 Weak transcription Osteobl bone
32 chr1:211814200-211816800 Weak transcription NHLF lung
33 chr1:211814400-211816200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:211814400-211816400 Weak transcription NH-A brain
35 chr1:211814600-211818600 Flanking Active TSS Hela-S3 cervix
36 chr1:211815000-211816600 Weak transcription Liver Liver
37 chr1:211816000-211817000 Enhancers Rectal Mucosa Donor 31 rectum
38 chr1:211816000-211817400 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr1:211816000-211817600 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr1:211816000-211818000 Enhancers Fetal Thymus thymus
41 chr1:211816000-211818400 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015