Variant report

Variant	rs11595126
Chromosome Location	chr10:91428283-91428284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:91427748..91429967-chr10:91430864..91434039,3	K562	blood:
2	chr10:91427349..91430030-chr10:91442278..91445461,3	K562	blood:
3	chr10:91428126..91429967-chr10:91431808..91434039,2	K562	blood:
4	chr10:91427763..91430030-chr10:91442877..91445461,2	K562	blood:
5	chr10:91427066..91429091-chr10:91459571..91461477,2	K562	blood:

Variant related genes	Relation type
ENSG00000138182	Chromatin interaction

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11593819	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11593892	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[YRI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11594682	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11597847	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598015	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11598257	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[YRI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12413697	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12414269	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12414849	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12415422	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1326195	1.00[ASN][1000 genomes]
rs17484219	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2026553	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[YRI][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34354493	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35059516	1.00[ASN][1000 genomes]
rs4426060	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56318555	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071258	1.00[ASN][1000 genomes]
rs72818732	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818736	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818740	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818744	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818750	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818751	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818757	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818758	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818759	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818766	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818768	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818770	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818773	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818774	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818781	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818783	0.84[EUR][1000 genomes]
rs72818786	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72818790	1.00[ASN][1000 genomes]
rs72818792	1.00[ASN][1000 genomes]
rs728852	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs997456	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91425400-91428400	Weak transcription	Fetal Muscle Leg	muscle
2	chr10:91425400-91430000	Weak transcription	HSMMtube	muscle
3	chr10:91427800-91429600	Enhancers	Fetal Intestine Large	intestine
4	chr10:91427800-91431400	Enhancers	HepG2	liver
5	chr10:91428000-91428600	Enhancers	HSMM	muscle
6	chr10:91428200-91428400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr10:91428200-91428400	Active TSS	Rectal Mucosa Donor 31	rectum
8	chr10:91428200-91428600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
9	chr10:91428200-91428600	Enhancers	HMEC	breast
10	chr10:91428200-91429000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr10:91428200-91429000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:91428200-91429000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr10:91428200-91429000	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr10:91428200-91429200	Enhancers	NHEK	skin
15	chr10:91428200-91429600	Enhancers	Fetal Intestine Small	intestine

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