Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10161524	1.00[ASN][1000 genomes]
rs11608265	1.00[ASN][1000 genomes]
rs11611316	1.00[ASN][1000 genomes]
rs11614531	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11615811	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12816326	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12822321	1.00[CHB][hapmap]
rs1350434	1.00[CHB][hapmap]
rs17591910	1.00[ASN][1000 genomes]
rs17651175	1.00[ASN][1000 genomes]
rs34015070	0.97[EUR][1000 genomes]
rs34065803	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34572373	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35513811	1.00[ASN][1000 genomes]
rs3906839	1.00[ASN][1000 genomes]
rs4768363	1.00[ASN][1000 genomes]
rs55725023	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61924341	1.00[ASN][1000 genomes]
rs61939329	1.00[ASN][1000 genomes]
rs61939354	1.00[ASN][1000 genomes]
rs61940382	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940385	1.00[ASN][1000 genomes]
rs61940407	1.00[ASN][1000 genomes]
rs73120223	1.00[ASN][1000 genomes]
rs882949	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3337301	chr12:41851654-42093677	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv899040	chr12:41905897-42181706	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41985000-41986400	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr12:41985000-41986800	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr12:41985200-41985600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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