The 2.0 version of rSNPBase

Variant report

Variant rs11621390
Chromosome Location chr14:32181875-32181876
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:32148000-32183600 Weak transcription Stomach Smooth Muscle stomach
2 chr14:32159000-32184800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr14:32162000-32186800 Weak transcription Brain Hippocampus Middle brain
4 chr14:32165600-32188200 Weak transcription Right Ventricle heart
5 chr14:32171000-32186400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr14:32171000-32200600 Weak transcription Placenta Amnion Placenta Amnion
7 chr14:32171800-32182200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr14:32172000-32186400 Weak transcription Pancreas Pancrea
9 chr14:32172000-32188200 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr14:32173000-32183000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr14:32173200-32182200 Weak transcription Thymus Thymus
12 chr14:32173400-32186400 Weak transcription Esophagus oesophagus
13 chr14:32173400-32189800 Weak transcription Primary B cells from cord blood blood
14 chr14:32173400-32218000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr14:32174200-32185600 Weak transcription HepG2 liver
16 chr14:32174600-32200000 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr14:32175200-32186600 Weak transcription Primary T cells from cord blood blood
18 chr14:32175200-32186600 Weak transcription Adipose Nuclei Adipose
19 chr14:32175200-32187000 Weak transcription Aorta Aorta
20 chr14:32175400-32182400 Weak transcription Primary B cells from peripheral blood blood
21 chr14:32175400-32182400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr14:32175400-32182400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr14:32175400-32183200 Weak transcription Gastric stomach
24 chr14:32175400-32185200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr14:32175400-32187000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr14:32175400-32193400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr14:32175400-32205600 Weak transcription Ovary ovary
28 chr14:32175600-32185200 Weak transcription Fetal Intestine Small intestine
29 chr14:32179000-32186200 Weak transcription Liver Liver
30 chr14:32179800-32182600 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr14:32180200-32182000 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr14:32180400-32182000 ZNF genes & repeats Fetal Stomach stomach
33 chr14:32180600-32182000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr14:32180600-32182000 ZNF genes & repeats Lung lung
35 chr14:32181400-32200600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr14:32181600-32182000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
37 chr14:32181800-32182200 ZNF genes & repeats Primary hematopoietic stem cells blood
38 chr14:32181800-32185200 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015