Variant report

Variant	rs73255188
Chromosome Location	chr14:32226824-32226825
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:71)

rs_ID	r²[population]
rs10132352	1.00[ASN][1000 genomes]
rs10133717	1.00[ASN][1000 genomes]
rs10133942	1.00[ASN][1000 genomes]
rs11156708	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11156720	1.00[ASN][1000 genomes]
rs11621039	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621112	0.90[AMR][1000 genomes]
rs11621248	1.00[ASN][1000 genomes]
rs11621390	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621521	1.00[ASN][1000 genomes]
rs11621686	1.00[ASN][1000 genomes]
rs11622367	1.00[ASN][1000 genomes]
rs11622373	1.00[ASN][1000 genomes]
rs11624141	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624290	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624768	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624788	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626536	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11627538	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628225	0.90[AMR][1000 genomes]
rs11628274	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11848123	1.00[ASN][1000 genomes]
rs11848353	1.00[ASN][1000 genomes]
rs11848392	1.00[ASN][1000 genomes]
rs12185052	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17098218	1.00[ASN][1000 genomes]
rs17098247	1.00[ASN][1000 genomes]
rs17098251	1.00[ASN][1000 genomes]
rs17379796	1.00[ASN][1000 genomes]
rs17379852	1.00[ASN][1000 genomes]
rs17379887	1.00[ASN][1000 genomes]
rs17381661	1.00[ASN][1000 genomes]
rs17464629	1.00[ASN][1000 genomes]
rs17464712	1.00[ASN][1000 genomes]
rs17464726	1.00[ASN][1000 genomes]
rs1953269	1.00[ASN][1000 genomes]
rs1953274	1.00[ASN][1000 genomes]
rs2378898	0.90[AMR][1000 genomes]
rs28494034	1.00[ASN][1000 genomes]
rs34753663	1.00[ASN][1000 genomes]
rs3993	1.00[ASN][1000 genomes]
rs4525402	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4525403	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55835620	1.00[ASN][1000 genomes]
rs58503445	1.00[ASN][1000 genomes]
rs58675313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59776229	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147907	1.00[ASN][1000 genomes]
rs7148175	1.00[ASN][1000 genomes]
rs7148196	1.00[ASN][1000 genomes]
rs7148222	1.00[ASN][1000 genomes]
rs7148561	1.00[ASN][1000 genomes]
rs7153389	1.00[ASN][1000 genomes]
rs7153738	1.00[ASN][1000 genomes]
rs73253276	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73255125	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73255184	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73259069	1.00[ASN][1000 genomes]
rs73259070	1.00[ASN][1000 genomes]
rs74041532	1.00[ASN][1000 genomes]
rs74041533	1.00[ASN][1000 genomes]
rs8004536	1.00[ASN][1000 genomes]
rs8004792	1.00[ASN][1000 genomes]
rs8005547	1.00[ASN][1000 genomes]
rs8006327	1.00[ASN][1000 genomes]
rs8009002	1.00[ASN][1000 genomes]
rs8009753	1.00[ASN][1000 genomes]
rs8016264	1.00[ASN][1000 genomes]
rs8016527	1.00[ASN][1000 genomes]
rs8020792	1.00[ASN][1000 genomes]
rs970488	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934206	chr14:31887749-32257097	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv564180	chr14:31958566-32368934	Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv564181	chr14:31958761-32363980	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv901592	chr14:32093548-32267323	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
7	nsv456199	chr14:32183849-32241873	ZNF genes & repeats Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv564183	chr14:32183849-32241873	Enhancers Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv974321	chr14:32213605-32227710	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32222600-32270200	Weak transcription	Aorta	Aorta

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