Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:39720733..39723031-chr14:39734245..39737381,4	K562	blood:
2	chr14:39720805..39723353-chr14:39735805..39738506,2	K562	blood:
3	chr14:39717370..39718891-chr14:39721042..39723991,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10137623	0.88[CHB][hapmap];0.95[JPT][hapmap]
rs10142479	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10142523	0.82[ASN][1000 genomes]
rs10144445	0.82[ASN][1000 genomes]
rs12433610	0.89[JPT][hapmap]
rs12881376	0.84[ASN][1000 genomes]
rs17092065	0.84[ASN][1000 genomes]
rs1980609	0.95[CHB][hapmap];0.90[JPT][hapmap]
rs1998193	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs2025027	0.95[JPT][hapmap]
rs2025028	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs28502509	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs4902459	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4902460	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61998553	0.84[ASN][1000 genomes]
rs6571911	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6571912	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6571921	0.88[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap]
rs7141840	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7147869	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7153074	0.85[JPT][hapmap]
rs7153523	0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs8006319	0.91[ASN][1000 genomes]
rs9322996	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs9743804	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053133	chr14:39657535-39770729	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39703600-39735400	Weak transcription	Pancreas	Pancrea
2	chr14:39704400-39734400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr14:39718600-39728000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr14:39721600-39722800	Strong transcription	Liver	Liver
5	chr14:39721600-39724200	Strong transcription	Fetal Intestine Large	intestine
6	chr14:39721600-39725200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr14:39721600-39728000	Weak transcription	Fetal Intestine Small	intestine
8	chr14:39721800-39723400	Weak transcription	HepG2	liver

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