The 2.0 version of rSNPBase

Variant report

Variant rs11638732
Chromosome Location chr15:55567567-55567568
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55520800-55574800 Weak transcription Stomach Smooth Muscle stomach
2 chr15:55542400-55581000 Weak transcription Fetal Intestine Small intestine
3 chr15:55547800-55571400 Weak transcription Aorta Aorta
4 chr15:55548600-55574800 Weak transcription Left Ventricle heart
5 chr15:55549200-55571600 Weak transcription HMEC breast
6 chr15:55550000-55571400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:55553200-55581000 Weak transcription Fetal Intestine Large intestine
8 chr15:55559800-55569400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr15:55559800-55571200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr15:55560200-55569800 Weak transcription Hela-S3 cervix
11 chr15:55560200-55571200 Weak transcription NHDF-Ad bronchial
12 chr15:55560200-55574800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr15:55560200-55575400 Weak transcription Thymus Thymus
14 chr15:55560400-55568600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr15:55560400-55571800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr15:55560600-55568200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr15:55560600-55569000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr15:55560600-55569600 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr15:55560600-55569600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr15:55560800-55567600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr15:55560800-55569400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr15:55561000-55567600 Weak transcription Primary B cells from peripheral blood blood
23 chr15:55561200-55568600 Weak transcription Primary hematopoietic stem cells blood
24 chr15:55561400-55571400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr15:55561400-55571400 Weak transcription Pancreas Pancrea
26 chr15:55561600-55576600 Weak transcription Liver Liver
27 chr15:55562400-55569600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr15:55562800-55569400 Enhancers Primary neutrophils fromperipheralblood blood
29 chr15:55563200-55571400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:55563800-55567600 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr15:55563800-55574800 Weak transcription Lung lung
32 chr15:55564000-55571000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr15:55564200-55571400 Weak transcription Stomach Mucosa stomach
34 chr15:55565000-55574800 Enhancers Primary monocytes fromperipheralblood blood
35 chr15:55565800-55569200 Enhancers Primary T helper cells PMA-I stimulated --
36 chr15:55566000-55569400 Enhancers Primary T killer memory cells from peripheral blood blood
37 chr15:55566000-55569600 Enhancers Monocytes-CD14+_RO01746 blood
38 chr15:55566400-55567600 Weak transcription GM12878-XiMat blood
39 chr15:55566600-55569600 Enhancers Primary T cells fromperipheralblood blood
40 chr15:55567200-55567600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr15:55567200-55567800 Strong transcription Fetal Stomach stomach
42 chr15:55567200-55567800 Strong transcription K562 blood
43 chr15:55567200-55569000 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr15:55567200-55572800 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr15:55567400-55567800 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr15:55567400-55567800 Enhancers Gastric stomach
47 chr15:55567400-55569400 Enhancers Primary T helper cells fromperipheralblood blood
48 chr15:55567400-55570800 Enhancers Primary B cells from cord blood blood
49 chr15:55567400-55571800 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015