The 2.0 version of rSNPBase

Variant report

Variant rs11692990
Chromosome Location chr2:128112190-128112191
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128069000-128117000 Weak transcription Small Intestine intestine
2 chr2:128077000-128116200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr2:128077200-128122800 Weak transcription Aorta Aorta
4 chr2:128079800-128114600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:128082000-128114600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr2:128083600-128117000 Weak transcription Brain Anterior Caudate brain
7 chr2:128092600-128122000 Weak transcription Pancreas Pancrea
8 chr2:128093200-128122800 Weak transcription Fetal Kidney kidney
9 chr2:128095600-128122000 Weak transcription Brain Angular Gyrus brain
10 chr2:128096400-128122200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:128096800-128117800 Weak transcription Duodenum Mucosa Duodenum
12 chr2:128096800-128119600 Weak transcription HSMM muscle
13 chr2:128100200-128119600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr2:128100400-128118400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:128100600-128119800 Weak transcription NHDF-Ad bronchial
16 chr2:128101600-128116400 Weak transcription Fetal Thymus thymus
17 chr2:128101600-128117800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:128102600-128122400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:128104600-128119400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:128105600-128127400 Weak transcription Primary hematopoietic stem cells blood
21 chr2:128106400-128112200 Weak transcription Dnd41 blood
22 chr2:128106400-128119200 Weak transcription Muscle Satellite Cultured Cells --
23 chr2:128106600-128112200 Weak transcription Brain Substantia Nigra brain
24 chr2:128107000-128122800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:128107200-128122800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr2:128107800-128119400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr2:128107800-128140200 Weak transcription Gastric stomach
28 chr2:128108000-128117000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr2:128108800-128112200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr2:128109400-128112200 Weak transcription Primary B cells from cord blood blood
31 chr2:128109600-128124600 Weak transcription Stomach Mucosa stomach
32 chr2:128109800-128114800 Weak transcription Esophagus oesophagus
33 chr2:128109800-128121000 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr2:128109800-128121400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:128109800-128121400 Weak transcription Left Ventricle heart
36 chr2:128109800-128121400 Weak transcription Ovary ovary
37 chr2:128109800-128121400 Weak transcription Right Atrium heart
38 chr2:128109800-128123000 Weak transcription Right Ventricle heart
39 chr2:128109800-128134000 Weak transcription Lung lung
40 chr2:128110000-128114600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr2:128110000-128116200 Weak transcription Psoas Muscle Psoas
42 chr2:128110200-128127800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr2:128111800-128112200 Enhancers Adipose Nuclei Adipose
44 chr2:128111800-128112400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:128111800-128112400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:128111800-128112400 Enhancers Primary monocytes fromperipheralblood blood
47 chr2:128111800-128112400 Enhancers Primary T helper cells PMA-I stimulated --
48 chr2:128111800-128112400 Enhancers K562 blood
49 chr2:128111800-128112600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr2:128111800-128112800 Enhancers A549 lung

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Last update: Aug 31, 2015