Variant report

Variant	rs11705637
Chromosome Location	chr22:32898797-32898798
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11538371	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11703157	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12166227	0.80[EUR][1000 genomes]
rs17771806	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61741510	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62232667	0.83[EUR][1000 genomes]
rs62232669	0.81[EUR][1000 genomes]
rs62232671	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62232672	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62241250	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62241251	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62241252	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62241253	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62241256	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62241257	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73170376	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73170400	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8142304	0.81[EUR][1000 genomes]
rs9621472	0.81[EUR][1000 genomes]
rs9621473	0.81[EUR][1000 genomes]

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32872200-32899600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr22:32889800-32908800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr22:32891800-32904400	Weak transcription	Hela-S3	cervix
4	chr22:32892200-32909400	Weak transcription	Aorta	Aorta
5	chr22:32893000-32899600	Weak transcription	K562	blood
6	chr22:32894400-32905200	Weak transcription	Fetal Brain Male	brain
7	chr22:32894400-32913200	Weak transcription	Fetal Brain Female	brain
8	chr22:32894600-32907200	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr22:32894800-32900200	Weak transcription	Gastric	stomach
10	chr22:32894800-32906600	Weak transcription	Primary B cells from peripheral blood	blood
11	chr22:32894800-32912000	Weak transcription	Fetal Intestine Small	intestine
12	chr22:32894800-32914200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr22:32895000-32899600	Weak transcription	Fetal Kidney	kidney
14	chr22:32895200-32899000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr22:32895200-32906200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr22:32895200-32906600	Weak transcription	HepG2	liver
17	chr22:32895200-32907200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr22:32895200-32909200	Weak transcription	Spleen	Spleen
19	chr22:32895200-32909600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr22:32895200-32910000	Weak transcription	HSMMtube	muscle
21	chr22:32895200-32913600	Weak transcription	Brain Germinal Matrix	brain
22	chr22:32895200-32918400	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr22:32895400-32901000	Weak transcription	Stomach Smooth Muscle	stomach
24	chr22:32895400-32907200	Weak transcription	Fetal Stomach	stomach
25	chr22:32895400-32914000	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr22:32895600-32905800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr22:32895800-32913200	Weak transcription	Placenta	Placenta
28	chr22:32896000-32906000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr22:32896000-32913200	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr22:32896400-32904400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr22:32896400-32907000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr22:32896400-32907600	Weak transcription	Liver	Liver
33	chr22:32896400-32909600	Weak transcription	Lung	lung
34	chr22:32896600-32906800	Weak transcription	Primary B cells from cord blood	blood
35	chr22:32896800-32898800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr22:32896800-32898800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr22:32897200-32907200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr22:32897200-32914200	Weak transcription	Primary T cells from cord blood	blood
39	chr22:32897600-32898800	Enhancers	Brain Hippocampus Middle	brain
40	chr22:32897600-32898800	Enhancers	Fetal Lung	lung
41	chr22:32897800-32898800	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
42	chr22:32897800-32898800	Enhancers	Brain Angular Gyrus	brain
43	chr22:32898000-32898800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr22:32898000-32898800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr22:32898000-32898800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr22:32898000-32898800	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr22:32898000-32898800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr22:32898000-32898800	Enhancers	Brain Cingulate Gyrus	brain
49	chr22:32898000-32898800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
50	chr22:32898000-32899000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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