The 2.0 version of rSNPBase

Variant report

Variant rs12166227
Chromosome Location chr22:32904505-32904506
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32889800-32908800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr22:32892200-32909400 Weak transcription Aorta Aorta
3 chr22:32894400-32905200 Weak transcription Fetal Brain Male brain
4 chr22:32894400-32913200 Weak transcription Fetal Brain Female brain
5 chr22:32894600-32907200 Weak transcription Placenta Amnion Placenta Amnion
6 chr22:32894800-32906600 Weak transcription Primary B cells from peripheral blood blood
7 chr22:32894800-32912000 Weak transcription Fetal Intestine Small intestine
8 chr22:32894800-32914200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr22:32895200-32906200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr22:32895200-32906600 Weak transcription HepG2 liver
11 chr22:32895200-32907200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr22:32895200-32909200 Weak transcription Spleen Spleen
13 chr22:32895200-32909600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr22:32895200-32910000 Weak transcription HSMMtube muscle
15 chr22:32895200-32913600 Weak transcription Brain Germinal Matrix brain
16 chr22:32895200-32918400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr22:32895400-32907200 Weak transcription Fetal Stomach stomach
18 chr22:32895400-32914000 Weak transcription Primary T cells fromperipheralblood blood
19 chr22:32895600-32905800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr22:32895800-32913200 Weak transcription Placenta Placenta
21 chr22:32896000-32906000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr22:32896000-32913200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr22:32896400-32907000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr22:32896400-32907600 Weak transcription Liver Liver
25 chr22:32896400-32909600 Weak transcription Lung lung
26 chr22:32896600-32906800 Weak transcription Primary B cells from cord blood blood
27 chr22:32897200-32907200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr22:32897200-32914200 Weak transcription Primary T cells from cord blood blood
29 chr22:32898600-32905200 Weak transcription Fetal Muscle Trunk muscle
30 chr22:32898600-32906600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr22:32898600-32906800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr22:32898600-32909800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr22:32898600-32913800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr22:32898600-32928000 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr22:32898800-32904600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr22:32898800-32904600 Weak transcription Brain Angular Gyrus brain
37 chr22:32898800-32904800 Weak transcription Brain Cingulate Gyrus brain
38 chr22:32898800-32904800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr22:32898800-32905000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr22:32898800-32905200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr22:32898800-32906800 Weak transcription Fetal Muscle Leg muscle
42 chr22:32898800-32909200 Weak transcription H1 Cell Line embryonic stem cell
43 chr22:32898800-32909600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr22:32898800-32927200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr22:32900000-32909400 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr22:32903800-32904600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr22:32904000-32905000 Enhancers HUES64 Cell Line embryonic stem cell
48 chr22:32904000-32924400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr22:32904200-32905000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr22:32904400-32904600 Enhancers Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015