Variant report
| Variant | rs5994580 |
|---|---|
| Chromosome Location | chr22:32908265-32908266 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:32889800-32908800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr22:32892200-32909400 | Weak transcription | Aorta | Aorta |
| 3 | chr22:32894400-32913200 | Weak transcription | Fetal Brain Female | brain |
| 4 | chr22:32894800-32912000 | Weak transcription | Fetal Intestine Small | intestine |
| 5 | chr22:32894800-32914200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 6 | chr22:32895200-32909200 | Weak transcription | Spleen | Spleen |
| 7 | chr22:32895200-32909600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr22:32895200-32910000 | Weak transcription | HSMMtube | muscle |
| 9 | chr22:32895200-32913600 | Weak transcription | Brain Germinal Matrix | brain |
| 10 | chr22:32895200-32918400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr22:32895400-32914000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 12 | chr22:32895800-32913200 | Weak transcription | Placenta | Placenta |
| 13 | chr22:32896000-32913200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 14 | chr22:32896400-32909600 | Weak transcription | Lung | lung |
| 15 | chr22:32897200-32914200 | Weak transcription | Primary T cells from cord blood | blood |
| 16 | chr22:32898600-32909800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 17 | chr22:32898600-32913800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 18 | chr22:32898600-32928000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 19 | chr22:32898800-32909200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 20 | chr22:32898800-32909600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 21 | chr22:32898800-32927200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr22:32900000-32909400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 23 | chr22:32904000-32924400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 24 | chr22:32905000-32909400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 25 | chr22:32905000-32909400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr22:32905400-32918600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 27 | chr22:32906600-32910600 | Enhancers | HepG2 | liver |
| 28 | chr22:32906800-32908800 | Strong transcription | Fetal Muscle Leg | muscle |
| 29 | chr22:32906800-32909000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 30 | chr22:32906800-32913000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 31 | chr22:32907000-32908600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 32 | chr22:32907000-32908800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr22:32907400-32909600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr22:32907600-32908600 | Enhancers | Liver | Liver |
| 35 | chr22:32907600-32909400 | Weak transcription | Brain Angular Gyrus | brain |
| 36 | chr22:32907600-32910800 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 37 | chr22:32907600-32912800 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr22:32907600-32913600 | Weak transcription | Adipose Nuclei | Adipose |
| 39 | chr22:32907800-32912800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 40 | chr22:32907800-32913200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 41 | chr22:32907800-32913800 | Weak transcription | Fetal Stomach | stomach |
| 42 | chr22:32908000-32912800 | Weak transcription | Brain Hippocampus Middle | brain |
| 43 | chr22:32908000-32913000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 44 | chr22:32908000-32913800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 45 | chr22:32908000-32916600 | Weak transcription | Brain Substantia Nigra | brain |
| 46 | chr22:32908200-32909200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
