Variant report

Variant	rs11726122
Chromosome Location	chr4:149046293-149046294
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10023128	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10023233	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11729617	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11731400	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17024404	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17024408	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28367185	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28368806	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs57616130	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62332226	0.91[AMR][1000 genomes]
rs7670173	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7670229	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9994070	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9994262	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149004600-149052400	Weak transcription	Esophagus	oesophagus
2	chr4:149018000-149085800	Weak transcription	Stomach Mucosa	stomach
3	chr4:149024000-149068600	Weak transcription	Right Ventricle	heart
4	chr4:149030800-149067000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr4:149033800-149047000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr4:149035400-149048200	Weak transcription	Brain Angular Gyrus	brain
7	chr4:149039400-149069400	Weak transcription	Colonic Mucosa	Colon
8	chr4:149040600-149083200	Weak transcription	Gastric	stomach
9	chr4:149041400-149067600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr4:149041400-149092000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr4:149041600-149047200	Weak transcription	Pancreas	Pancrea
12	chr4:149041600-149061400	Weak transcription	Fetal Stomach	stomach
13	chr4:149041600-149069600	Weak transcription	Brain Anterior Caudate	brain
14	chr4:149041800-149074400	Weak transcription	Lung	lung
15	chr4:149042000-149046400	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr4:149044200-149046400	ZNF genes & repeats	Adipose Nuclei	Adipose
17	chr4:149044600-149046600	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
18	chr4:149044800-149047400	ZNF genes & repeats	Liver	Liver
19	chr4:149045400-149047400	ZNF genes & repeats	Fetal Muscle Leg	muscle
20	chr4:149045600-149104800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr4:149045800-149046400	ZNF genes & repeats	Rectal Smooth Muscle	rectum
22	chr4:149046200-149046600	ZNF genes & repeats	Brain Substantia Nigra	brain
23	chr4:149046200-149046600	ZNF genes & repeats	Ovary	ovary

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