Variant report
Variant | rs11727424 |
---|---|
Chromosome Location | chr4:127402924-127402925 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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(count:2 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs11098870 | 0.87[EUR][1000 genomes] |
rs11098871 | 0.85[AFR][1000 genomes] |
rs11098872 | 0.85[AFR][1000 genomes] |
rs11098874 | 0.86[AFR][1000 genomes];0.85[AMR][1000 genomes] |
rs11722574 | 0.85[AFR][1000 genomes] |
rs11730843 | 0.83[AFR][1000 genomes] |
rs11734709 | 0.85[EUR][1000 genomes] |
rs12506128 | 0.83[AFR][1000 genomes] |
rs12508005 | 0.85[AFR][1000 genomes] |
rs12508071 | 0.83[AFR][1000 genomes] |
rs12649899 | 0.84[AFR][1000 genomes] |
rs12651126 | 0.83[AFR][1000 genomes] |
rs1355111 | 0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1508977 | 0.83[AFR][1000 genomes] |
rs1508978 | 0.85[AFR][1000 genomes] |
rs1605756 | 0.97[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs167506 | 1.00[ASN][1000 genomes] |
rs313103 | 1.00[ASN][1000 genomes] |
rs313130 | 1.00[ASN][1000 genomes] |
rs313131 | 1.00[ASN][1000 genomes] |
rs313134 | 1.00[ASN][1000 genomes] |
rs313137 | 1.00[ASN][1000 genomes] |
rs313138 | 1.00[ASN][1000 genomes] |
rs432446 | 1.00[ASN][1000 genomes] |
rs4444841 | 1.00[ASN][1000 genomes] |
rs4834125 | 1.00[ASN][1000 genomes] |
rs60133914 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61352395 | 0.83[AFR][1000 genomes] |
rs62321712 | 1.00[ASN][1000 genomes] |
rs62321713 | 1.00[ASN][1000 genomes] |
rs62321714 | 1.00[ASN][1000 genomes] |
rs62321715 | 1.00[ASN][1000 genomes] |
rs62321722 | 1.00[ASN][1000 genomes] |
rs62321723 | 1.00[ASN][1000 genomes] |
rs62322676 | 1.00[ASN][1000 genomes] |
rs62322678 | 1.00[ASN][1000 genomes] |
rs62322679 | 1.00[ASN][1000 genomes] |
rs62322680 | 1.00[ASN][1000 genomes] |
rs62322683 | 1.00[ASN][1000 genomes] |
rs62322684 | 1.00[ASN][1000 genomes] |
rs62324762 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv879906 | chr4:127354073-127414252 | Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | n/a |
2 | nsv595385 | chr4:127383473-127451806 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:127392200-127413200 | Weak transcription | K562 | blood |