Variant report

Variant	rs1355111
Chromosome Location	chr4:127374904-127374905
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:127374746..127378730-chr4:127382630..127385054,3	K562	blood:

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs1013173	0.82[AFR][1000 genomes]
rs11727424	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11730843	0.81[CEU][hapmap]
rs11734709	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12499737	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12500602	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12501333	0.82[AFR][1000 genomes]
rs12504629	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12505340	0.82[AFR][1000 genomes]
rs12506128	0.87[AFR][1000 genomes]
rs12509491	0.83[AMR][1000 genomes]
rs12510218	0.83[AFR][1000 genomes]
rs12651126	0.87[AFR][1000 genomes]
rs1355106	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1355107	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1508980	0.82[AFR][1000 genomes]
rs1508981	0.82[AFR][1000 genomes]
rs1508982	0.82[AFR][1000 genomes]
rs1508983	0.87[EUR][1000 genomes]
rs1508984	0.87[EUR][1000 genomes]
rs1508985	0.87[EUR][1000 genomes]
rs1567343	0.82[AFR][1000 genomes]
rs1567344	0.82[AFR][1000 genomes]
rs1605756	0.89[AMR][1000 genomes]
rs167506	1.00[ASN][1000 genomes]
rs313103	1.00[ASN][1000 genomes]
rs313130	1.00[ASN][1000 genomes]
rs313131	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs313134	1.00[ASN][1000 genomes]
rs313137	1.00[ASN][1000 genomes]
rs313138	1.00[ASN][1000 genomes]
rs34165900	0.82[AFR][1000 genomes]
rs432446	1.00[ASN][1000 genomes]
rs4444841	1.00[ASN][1000 genomes]
rs4834125	1.00[ASN][1000 genomes]
rs57761577	0.83[AFR][1000 genomes]
rs60133914	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61352395	0.87[AFR][1000 genomes]
rs62321712	1.00[ASN][1000 genomes]
rs62321713	1.00[ASN][1000 genomes]
rs62321714	1.00[ASN][1000 genomes]
rs62321715	1.00[ASN][1000 genomes]
rs62321722	1.00[ASN][1000 genomes]
rs62321723	1.00[ASN][1000 genomes]
rs62322676	1.00[ASN][1000 genomes]
rs62322678	1.00[ASN][1000 genomes]
rs62322679	1.00[ASN][1000 genomes]
rs62322680	1.00[ASN][1000 genomes]
rs62322683	1.00[ASN][1000 genomes]
rs62322684	1.00[ASN][1000 genomes]
rs62324762	1.00[ASN][1000 genomes]
rs72919440	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879906	chr4:127354073-127414252	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127346200-127388400	Weak transcription	K562	blood

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