Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1013173	0.80[AMR][1000 genomes]
rs11098870	0.88[AMR][1000 genomes]
rs11734709	0.88[AMR][1000 genomes]
rs12499737	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12500602	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12501333	0.82[AMR][1000 genomes]
rs12504629	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12505340	0.82[AMR][1000 genomes]
rs12506125	0.91[ASN][1000 genomes]
rs12506128	0.84[AMR][1000 genomes]
rs12509491	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12510218	0.84[AMR][1000 genomes]
rs12512849	0.91[ASN][1000 genomes]
rs12651126	0.84[AMR][1000 genomes]
rs1355106	0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1355107	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1355111	0.83[AMR][1000 genomes]
rs1508980	0.80[AMR][1000 genomes]
rs1508981	0.80[AMR][1000 genomes]
rs1508982	0.80[AMR][1000 genomes]
rs1508983	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1508984	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1508985	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1567343	0.80[AMR][1000 genomes]
rs1567344	0.80[AMR][1000 genomes]
rs34165900	0.80[AMR][1000 genomes]
rs41338247	0.91[ASN][1000 genomes]
rs57761577	0.84[AMR][1000 genomes]
rs61352395	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879906	chr4:127354073-127414252	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127346200-127388400	Weak transcription	K562	blood
2	chr4:127379400-127380400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:127379600-127380400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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