Variant report

Variant rs11744218
Chromosome Location chr5:112421316-112421317
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112371400-112423800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:112379600-112424200 Weak transcription Psoas Muscle Psoas
3 chr5:112384000-112453000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr5:112391600-112439000 Weak transcription Gastric stomach
5 chr5:112399000-112432800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr5:112399800-112441800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr5:112400800-112423800 Weak transcription Aorta Aorta
8 chr5:112402600-112425600 Weak transcription Rectal Smooth Muscle rectum
9 chr5:112404000-112426000 Weak transcription Brain Cingulate Gyrus brain
10 chr5:112404400-112428000 Weak transcription Placenta Placenta
11 chr5:112404400-112436800 Weak transcription Fetal Brain Male brain
12 chr5:112404800-112425400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr5:112411000-112431800 Weak transcription Spleen Spleen
14 chr5:112411200-112425800 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr5:112411200-112443400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr5:112411600-112425800 Weak transcription Primary T cells fromperipheralblood blood
17 chr5:112411800-112428000 Weak transcription Fetal Intestine Large intestine
18 chr5:112412000-112435200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr5:112412200-112432400 Weak transcription Fetal Intestine Small intestine
20 chr5:112414200-112425600 Weak transcription Brain Hippocampus Middle brain
21 chr5:112416600-112422600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:112416600-112422800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr5:112417400-112423400 Strong transcription Esophagus oesophagus
24 chr5:112417800-112421400 Strong transcription iPS-20b Cell Line embryonic stem cell
25 chr5:112417800-112436800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr5:112418200-112422200 Weak transcription Brain Angular Gyrus brain
27 chr5:112418200-112425600 Weak transcription Lung lung
28 chr5:112418400-112422800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:112418400-112425400 Weak transcription Primary T cells from cord blood blood
30 chr5:112418400-112425600 Weak transcription Brain Anterior Caudate brain
31 chr5:112418400-112425600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:112418400-112441600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr5:112418600-112421600 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr5:112418600-112422000 Weak transcription Duodenum Mucosa Duodenum
35 chr5:112418600-112422200 Weak transcription Fetal Kidney kidney
36 chr5:112418600-112424400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:112418600-112425000 Weak transcription Muscle Satellite Cultured Cells --
38 chr5:112418600-112425200 Weak transcription HUVEC blood vessel
39 chr5:112418600-112425200 Weak transcription NH-A brain
40 chr5:112418600-112426800 Weak transcription H1 Cell Line embryonic stem cell
41 chr5:112418600-112436600 Weak transcription H9 Cell Line embryonic stem cell
42 chr5:112418600-112441400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:112418800-112422800 Strong transcription Liver Liver
44 chr5:112418800-112425200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr5:112418800-112425200 Weak transcription NHDF-Ad bronchial
46 chr5:112418800-112425800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr5:112419200-112424000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr5:112419400-112422400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr5:112419600-112421800 Enhancers Fetal Heart heart
50 chr5:112419600-112436600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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