Variant report

Variant rs11750093
Chromosome Location chr5:112408177-112408178
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112363800-112409200 Weak transcription Colonic Mucosa Colon
2 chr5:112363800-112417800 Weak transcription Duodenum Mucosa Duodenum
3 chr5:112371400-112423800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:112379600-112424200 Weak transcription Psoas Muscle Psoas
5 chr5:112383200-112409400 Strong transcription Liver Liver
6 chr5:112384000-112453000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr5:112384200-112411000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr5:112390800-112410800 Weak transcription Fetal Intestine Small intestine
9 chr5:112391600-112439000 Weak transcription Gastric stomach
10 chr5:112395000-112411600 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr5:112395600-112417600 Weak transcription Brain Angular Gyrus brain
12 chr5:112395600-112420400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:112395800-112408600 Weak transcription Brain Anterior Caudate brain
14 chr5:112395800-112409000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:112396000-112417200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:112398600-112409800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr5:112398800-112412400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:112399000-112432800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr5:112399200-112417600 Weak transcription Fetal Kidney kidney
20 chr5:112399800-112408400 Weak transcription Right Atrium heart
21 chr5:112399800-112441800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr5:112400000-112417600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr5:112400200-112411400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:112400200-112416800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:112400200-112416800 Weak transcription Muscle Satellite Cultured Cells --
26 chr5:112400400-112411200 Weak transcription Thymus Thymus
27 chr5:112400800-112423800 Weak transcription Aorta Aorta
28 chr5:112401800-112410600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr5:112402400-112408200 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr5:112402600-112425600 Weak transcription Rectal Smooth Muscle rectum
31 chr5:112402800-112410600 Weak transcription Fetal Intestine Large intestine
32 chr5:112402800-112410600 Weak transcription Pancreas Pancrea
33 chr5:112403000-112408400 Weak transcription Primary T cells fromperipheralblood blood
34 chr5:112403000-112409000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr5:112403000-112410600 Weak transcription Spleen Spleen
36 chr5:112403800-112418400 Weak transcription Brain Substantia Nigra brain
37 chr5:112404000-112413800 Weak transcription Brain Hippocampus Middle brain
38 chr5:112404000-112426000 Weak transcription Brain Cingulate Gyrus brain
39 chr5:112404200-112410800 Weak transcription Brain Germinal Matrix brain
40 chr5:112404400-112408200 Strong transcription Left Ventricle heart
41 chr5:112404400-112411800 Strong transcription Stomach Smooth Muscle stomach
42 chr5:112404400-112428000 Weak transcription Placenta Placenta
43 chr5:112404400-112436800 Weak transcription Fetal Brain Male brain
44 chr5:112404600-112408600 Weak transcription Fetal Stomach stomach
45 chr5:112404600-112408800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:112404600-112410600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:112404600-112411200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr5:112404600-112411600 Weak transcription Fetal Lung lung
49 chr5:112404600-112417000 Weak transcription HSMMtube muscle
50 chr5:112404800-112408200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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