Variant report

Variant rs6879633
Chromosome Location chr5:112403399-112403400
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112363800-112409200 Weak transcription Colonic Mucosa Colon
2 chr5:112363800-112417800 Weak transcription Duodenum Mucosa Duodenum
3 chr5:112370200-112406600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:112371400-112423800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:112379600-112424200 Weak transcription Psoas Muscle Psoas
6 chr5:112383200-112409400 Strong transcription Liver Liver
7 chr5:112384000-112453000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr5:112384200-112411000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr5:112390800-112410800 Weak transcription Fetal Intestine Small intestine
10 chr5:112391600-112439000 Weak transcription Gastric stomach
11 chr5:112395000-112411600 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr5:112395600-112403400 Weak transcription Brain Cingulate Gyrus brain
13 chr5:112395600-112403600 Weak transcription Fetal Brain Male brain
14 chr5:112395600-112417600 Weak transcription Brain Angular Gyrus brain
15 chr5:112395600-112420400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr5:112395800-112408600 Weak transcription Brain Anterior Caudate brain
17 chr5:112395800-112409000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr5:112396000-112417200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr5:112396800-112404600 Genic enhancers Fetal Stomach stomach
20 chr5:112397400-112405000 Weak transcription H9 Cell Line embryonic stem cell
21 chr5:112397800-112403800 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr5:112398400-112403400 Strong transcription Stomach Smooth Muscle stomach
23 chr5:112398400-112404600 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr5:112398400-112407400 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr5:112398600-112407000 Strong transcription NHEK skin
26 chr5:112398600-112409800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr5:112398800-112412400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr5:112399000-112404600 Weak transcription Fetal Heart heart
29 chr5:112399000-112405200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:112399000-112406000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr5:112399000-112406800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:112399000-112432800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr5:112399200-112417600 Weak transcription Fetal Kidney kidney
34 chr5:112399400-112404000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr5:112399600-112405800 Weak transcription HUVEC blood vessel
36 chr5:112399800-112403400 Weak transcription Brain Substantia Nigra brain
37 chr5:112399800-112405000 Weak transcription H1 Cell Line embryonic stem cell
38 chr5:112399800-112406200 Weak transcription Colon Smooth Muscle Colon
39 chr5:112399800-112408400 Weak transcription Right Atrium heart
40 chr5:112399800-112441800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr5:112400000-112403600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr5:112400000-112417600 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr5:112400200-112403600 Weak transcription Brain Hippocampus Middle brain
44 chr5:112400200-112411400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:112400200-112416800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:112400200-112416800 Weak transcription Muscle Satellite Cultured Cells --
47 chr5:112400400-112403800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr5:112400400-112404600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:112400400-112405000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr5:112400400-112411200 Weak transcription Thymus Thymus

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