Variant report

Variant rs11756425
Chromosome Location chr6:36841756-36841757
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36817200-36842000 Weak transcription Stomach Mucosa stomach
2 chr6:36819400-36841800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:36832200-36842000 Weak transcription Aorta Aorta
4 chr6:36833800-36841800 Weak transcription Esophagus oesophagus
5 chr6:36835600-36842000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:36835600-36842000 Weak transcription Lung lung
7 chr6:36837000-36842200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:36840400-36842200 Enhancers Spleen Spleen
9 chr6:36840800-36841800 Transcr. at gene 5' and 3' K562 blood
10 chr6:36841000-36843200 Active TSS GM12878-XiMat blood
11 chr6:36841200-36841800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
12 chr6:36841200-36841800 Enhancers Primary monocytes fromperipheralblood blood
13 chr6:36841200-36841800 Enhancers Primary neutrophils fromperipheralblood blood
14 chr6:36841200-36841800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr6:36841200-36841800 Flanking Active TSS HepG2 liver
16 chr6:36841200-36842000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
17 chr6:36841200-36842000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:36841200-36842200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:36841200-36843200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
20 chr6:36841400-36841800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:36841400-36841800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:36841400-36841800 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:36841400-36841800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
24 chr6:36841400-36841800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
25 chr6:36841400-36841800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:36841400-36841800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
27 chr6:36841400-36841800 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr6:36841400-36841800 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr6:36841400-36841800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:36841400-36841800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
31 chr6:36841400-36841800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:36841400-36841800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
33 chr6:36841400-36841800 Enhancers Brain Substantia Nigra brain
34 chr6:36841400-36841800 Enhancers Colonic Mucosa Colon
35 chr6:36841400-36841800 Enhancers Colon Smooth Muscle Colon
36 chr6:36841400-36841800 Flanking Active TSS Fetal Intestine Large intestine
37 chr6:36841400-36841800 Enhancers Gastric stomach
38 chr6:36841400-36841800 Enhancers Left Ventricle heart
39 chr6:36841400-36841800 Enhancers Ovary ovary
40 chr6:36841400-36841800 Enhancers Pancreas Pancrea
41 chr6:36841400-36841800 Enhancers Placenta Amnion Placenta Amnion
42 chr6:36841400-36841800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
43 chr6:36841400-36841800 Enhancers Sigmoid Colon Sigmoid Colon
44 chr6:36841400-36841800 Flanking Active TSS HMEC breast
45 chr6:36841400-36841800 Flanking Active TSS NHDF-Ad bronchial
46 chr6:36841400-36842000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr6:36841400-36842000 Enhancers Primary B cells from peripheral blood blood
48 chr6:36841400-36842000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr6:36841400-36842000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
50 chr6:36841400-36842000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood

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