Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11769472	0.88[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11770458	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11770706	0.93[CEU][hapmap];1.00[CHB][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11771324	0.89[EUR][1000 genomes]
rs1922901	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2188548	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2285541	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs28653710	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3111433	0.91[YRI][hapmap]
rs34571206	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4478510	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62473830	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62476688	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6946196	0.86[EUR][1000 genomes]
rs6947690	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6973084	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs726593	0.85[CHB][hapmap]
rs728461	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs765506	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs765507	0.84[ASN][1000 genomes]
rs7802889	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
2	nsv889055	chr7:112174089-112353440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112213200-112220000	Weak transcription	Right Ventricle	heart
2	chr7:112214000-112221600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr7:112217000-112219400	Weak transcription	Left Ventricle	heart
4	chr7:112218200-112222000	Enhancers	Fetal Heart	heart
5	chr7:112219000-112220800	Weak transcription	HSMMtube	muscle

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