Variant report

Variant	rs11776578
Chromosome Location	chr8:91250953-91250954
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11777851	1.00[ASN][1000 genomes]
rs11779938	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11989856	1.00[ASN][1000 genomes]
rs12114040	1.00[ASN][1000 genomes]
rs12115012	1.00[ASN][1000 genomes]
rs16904078	1.00[ASN][1000 genomes]
rs55641669	1.00[ASN][1000 genomes]
rs55642901	1.00[ASN][1000 genomes]
rs55899852	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56044560	1.00[ASN][1000 genomes]
rs56400806	1.00[ASN][1000 genomes]
rs58912966	1.00[ASN][1000 genomes]
rs60226967	1.00[ASN][1000 genomes]
rs73695307	1.00[ASN][1000 genomes]
rs73695315	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73695320	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73698034	1.00[ASN][1000 genomes]
rs9969448	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91250400-91251400	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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