Variant report

Variant	rs73695307
Chromosome Location	chr8:91233886-91233887
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91012457..91015215-chr8:91233847..91236431,2	K562	blood:
2	chr8:91012457..91016466-chr8:91233540..91237741,4	K562	blood:
3	chr8:91210166..91212699-chr8:91233871..91237591,3	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DECR1-1	chr8:91233745-91233974	ENSG00000253394
2	lnc-DECR1-1	chr8:91233875-91233974	ENSG00000253394
3	lnc-DECR1-1	chr8:91233766-91233974	ENSG00000253394
4	lnc-DECR1-1	chr8:91233716-91233974	ENSG00000253394
5	lnc-DECR1-1	chr8:91233716-91233974	NONHSAT127644

No data

No data

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11776578	1.00[ASN][1000 genomes]
rs11777851	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11779938	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11989856	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12114040	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12115012	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16904078	0.82[AFR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16904104	1.00[EUR][1000 genomes]
rs55641669	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55642901	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55899852	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56044560	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56400806	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58912966	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60226967	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73695315	1.00[ASN][1000 genomes]
rs73695320	1.00[ASN][1000 genomes]
rs73698034	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9969448	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	esv2757281	chr8:91090821-91235335	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91228400-91236800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr8:91229600-91238600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:91232400-91236400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:91233400-91234000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:91233600-91235600	Active TSS	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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