Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:91010957..91014069-chr8:91255866..91259257,5	MCF-7	breast:
2	chr8:91017521..91019447-chr8:91254781..91258818,3	MCF-7	breast:
3	chr8:91012148..91013832-chr8:91256336..91257759,13	MCF-7	breast:
4	chr8:91237101..91239532-chr8:91255640..91258349,3	K562	blood:
5	chr8:91249836..91251635-chr8:91254921..91257307,2	MCF-7	breast:
6	chr8:91012783..91013986-chr8:91256750..91257847,6	K562	blood:

Variant related genes	Relation type
ENSG00000104325	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11776578	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11777851	1.00[ASN][1000 genomes]
rs11779938	1.00[ASN][1000 genomes]
rs11989856	1.00[ASN][1000 genomes]
rs12114040	1.00[ASN][1000 genomes]
rs12115012	1.00[ASN][1000 genomes]
rs16904078	1.00[ASN][1000 genomes]
rs16904193	0.85[AFR][1000 genomes]
rs16904195	0.85[AFR][1000 genomes]
rs55641669	1.00[ASN][1000 genomes]
rs55642901	1.00[ASN][1000 genomes]
rs55899852	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56044560	1.00[ASN][1000 genomes]
rs56400806	1.00[ASN][1000 genomes]
rs58912966	1.00[ASN][1000 genomes]
rs60226967	1.00[ASN][1000 genomes]
rs73695307	1.00[ASN][1000 genomes]
rs73695315	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73698034	1.00[ASN][1000 genomes]
rs9969448	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91256400-91257000	Enhancers	Brain Substantia Nigra	brain
2	chr8:91256600-91257000	Genic enhancers	K562	blood

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