Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49231670..49234533-chr8:49280162..49283024,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10089957	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10090055	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10093331	1.00[CEU][hapmap];0.96[GIH][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs10094488	0.86[EUR][1000 genomes]
rs10103603	0.82[EUR][1000 genomes]
rs10107550	0.95[EUR][1000 genomes]
rs10111777	1.00[CEU][hapmap];0.96[GIH][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs10111784	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs10441555	0.84[EUR][1000 genomes]
rs11780976	0.84[EUR][1000 genomes]
rs11783234	0.84[EUR][1000 genomes]
rs12334641	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16935766	0.82[EUR][1000 genomes]
rs16935801	1.00[CEU][hapmap];0.96[GIH][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs16936586	0.86[EUR][1000 genomes]
rs28425774	0.84[EUR][1000 genomes]
rs28650140	0.84[EUR][1000 genomes]
rs28690717	0.84[EUR][1000 genomes]
rs28759715	0.84[EUR][1000 genomes]
rs4873278	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4873279	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7017698	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs7833910	0.84[EUR][1000 genomes]
rs7838754	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831311	chr8:49106160-49290209	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49278200-49282200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr8:49280600-49282800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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