Variant report

Variant	rs11781753
Chromosome Location	chr8:122889159-122889160
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10086515	0.86[ASN][1000 genomes]
rs10086612	0.86[ASN][1000 genomes]
rs10094028	0.86[ASN][1000 genomes]
rs10095392	0.86[ASN][1000 genomes]
rs10101375	0.86[ASN][1000 genomes]
rs10101403	0.86[ASN][1000 genomes]
rs10101470	0.86[ASN][1000 genomes]
rs10104333	0.86[ASN][1000 genomes]
rs10104809	0.86[ASN][1000 genomes]
rs10105318	0.86[ASN][1000 genomes]
rs10108701	0.86[ASN][1000 genomes]
rs10108705	0.86[ASN][1000 genomes]
rs10110100	0.86[ASN][1000 genomes]
rs10110106	0.86[ASN][1000 genomes]
rs10110134	0.86[ASN][1000 genomes]
rs10110297	0.86[ASN][1000 genomes]
rs10956058	0.86[ASN][1000 genomes]
rs10956062	0.86[ASN][1000 genomes]
rs11990026	0.86[ASN][1000 genomes]
rs12676842	0.86[ASN][1000 genomes]
rs13251152	0.86[ASN][1000 genomes]
rs13261004	0.86[ASN][1000 genomes]
rs13263521	0.86[ASN][1000 genomes]
rs4128641	0.86[ASN][1000 genomes]
rs4242327	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4242328	0.86[ASN][1000 genomes]
rs4268133	0.86[ASN][1000 genomes]
rs4317573	0.86[ASN][1000 genomes]
rs4327868	0.86[ASN][1000 genomes]
rs4413781	0.86[ASN][1000 genomes]
rs4431601	0.86[ASN][1000 genomes]
rs4433151	0.86[ASN][1000 genomes]
rs4464973	0.86[ASN][1000 genomes]
rs4518675	0.86[ASN][1000 genomes]
rs4529469	0.86[ASN][1000 genomes]
rs4537307	0.86[ASN][1000 genomes]
rs4567046	0.86[ASN][1000 genomes]
rs4582571	0.86[ASN][1000 genomes]
rs4582572	0.86[ASN][1000 genomes]
rs4609198	0.86[ASN][1000 genomes]
rs4641072	0.86[ASN][1000 genomes]
rs4871212	0.86[ASN][1000 genomes]
rs6470047	0.86[ASN][1000 genomes]
rs6984179	0.86[ASN][1000 genomes]
rs6999640	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs6999793	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7001379	0.86[ASN][1000 genomes]
rs7001394	0.86[ASN][1000 genomes]
rs7001741	0.86[ASN][1000 genomes]
rs7002399	0.86[ASN][1000 genomes]
rs7002779	0.86[ASN][1000 genomes]
rs7003107	0.86[ASN][1000 genomes]
rs7003896	0.86[ASN][1000 genomes]
rs7004948	0.86[ASN][1000 genomes]
rs7009055	0.86[ASN][1000 genomes]
rs7012540	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[MEX][hapmap]
rs7822873	0.86[ASN][1000 genomes]
rs9297655	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752207	chr8:122869651-122961848	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122881800-122896800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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