Variant report

Variant	rs10110100
Chromosome Location	chr8:122829042-122829043
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10086515	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10086612	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10094028	1.00[ASN][1000 genomes]
rs10094891	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10095392	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10101375	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10101403	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10101470	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10104333	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10104585	1.00[EUR][1000 genomes]
rs10104809	1.00[ASN][1000 genomes]
rs10105318	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10108701	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10108705	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10110106	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10110134	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10110297	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1030977	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1030978	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1030979	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10956058	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10956062	1.00[ASN][1000 genomes]
rs11781753	0.86[ASN][1000 genomes]
rs11990026	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12676842	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13251152	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13251300	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13261004	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13263521	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1371715	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1371716	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1371717	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1371718	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1371719	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs279627	0.81[EUR][1000 genomes]
rs279637	0.81[EUR][1000 genomes]
rs279638	0.81[EUR][1000 genomes]
rs279639	0.81[EUR][1000 genomes]
rs4128641	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4242327	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4242328	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4268133	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4317573	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4327868	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4413781	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4431601	1.00[ASN][1000 genomes]
rs4433151	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4464973	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4518675	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4520174	0.91[EUR][1000 genomes]
rs4529469	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4537307	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4567046	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4582571	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4582572	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4609198	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4641072	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4645569	1.00[EUR][1000 genomes]
rs4871212	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6470041	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6470047	1.00[ASN][1000 genomes]
rs6980644	0.95[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6984179	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6999640	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6999793	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7001379	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7001394	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7001741	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7002399	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7002779	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7003107	1.00[ASN][1000 genomes]
rs7003690	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7003896	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7004948	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7009055	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7012540	1.00[CHB][hapmap]
rs7822873	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9297655	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs964868	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs964869	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122816400-122830600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:122824800-122829800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:122827000-122831000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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