Variant report

Variant	rs11812123
Chromosome Location	chr10:18520208-18520209
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11013099	0.81[AFR][1000 genomes]
rs11013100	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013102	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12241870	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12242606	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243591	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243820	0.91[AFR][1000 genomes]
rs12245011	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12260611	0.83[AMR][1000 genomes]
rs12261529	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12263728	0.83[AMR][1000 genomes]
rs12265913	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12266897	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28656923	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56842311	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61075188	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069240	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069685	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7083672	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7090146	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18511200-18520400	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr10:18514000-18522400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr10:18514000-18522800	Weak transcription	Esophagus	oesophagus
4	chr10:18514400-18524400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr10:18514400-18525600	Weak transcription	Fetal Lung	lung
6	chr10:18514400-18526600	Weak transcription	Rectal Smooth Muscle	rectum
7	chr10:18515400-18522000	Weak transcription	Ovary	ovary
8	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr10:18516800-18524800	Weak transcription	Fetal Stomach	stomach
10	chr10:18518000-18521000	Enhancers	Muscle Satellite Cultured Cells	--
11	chr10:18518000-18521000	Enhancers	Osteobl	bone
12	chr10:18518200-18520800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr10:18518200-18520800	Enhancers	NHDF-Ad	bronchial
14	chr10:18518400-18520800	Enhancers	NHLF	lung
15	chr10:18519200-18521000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr10:18519400-18521800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr10:18519400-18522400	Weak transcription	Fetal Heart	heart
18	chr10:18519600-18522600	Weak transcription	Colon Smooth Muscle	Colon
19	chr10:18520000-18520800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr10:18520000-18520800	Weak transcription	NH-A	brain
21	chr10:18520200-18520600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr10:18520200-18520600	Enhancers	HSMMtube	muscle

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