Variant report

Variant	rs12245011
Chromosome Location	chr10:18523547-18523548
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11013100	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013101	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013102	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11812123	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12241870	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12242606	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243591	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243820	0.92[AFR][1000 genomes]
rs12260611	0.83[AMR][1000 genomes]
rs12261529	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12263728	0.83[AMR][1000 genomes]
rs12265913	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12266897	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28656923	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56842311	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61075188	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069240	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069685	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7083672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7090146	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18514400-18524400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr10:18514400-18525600	Weak transcription	Fetal Lung	lung
3	chr10:18514400-18526600	Weak transcription	Rectal Smooth Muscle	rectum
4	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:18516800-18524800	Weak transcription	Fetal Stomach	stomach
6	chr10:18520800-18525600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr10:18522000-18523600	Enhancers	Ovary	ovary
8	chr10:18522200-18523600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:18522400-18523600	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea
11	chr10:18523200-18524400	Weak transcription	Colon Smooth Muscle	Colon
12	chr10:18523200-18524600	Weak transcription	Fetal Heart	heart
13	chr10:18523200-18525600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr10:18523200-18529600	Weak transcription	Esophagus	oesophagus
15	chr10:18523200-18529600	Weak transcription	Left Ventricle	heart
16	chr10:18523200-18536000	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr10:18523400-18523600	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr10:18523400-18525600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr10:18523400-18529200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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