Variant report

Variant	rs7083672
Chromosome Location	chr10:18522294-18522295
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11013100	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013101	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11013102	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11812123	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12241870	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12242606	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243591	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12243820	0.92[AFR][1000 genomes]
rs12245011	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12260611	0.83[AMR][1000 genomes]
rs12261529	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12263728	0.83[AMR][1000 genomes]
rs12265913	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12266897	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17613287	1.00[JPT][hapmap]
rs28656923	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56842311	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61075188	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069240	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7069685	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7090146	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18514000-18522400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:18514000-18522800	Weak transcription	Esophagus	oesophagus
3	chr10:18514400-18524400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr10:18514400-18525600	Weak transcription	Fetal Lung	lung
5	chr10:18514400-18526600	Weak transcription	Rectal Smooth Muscle	rectum
6	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:18516800-18524800	Weak transcription	Fetal Stomach	stomach
8	chr10:18519400-18522400	Weak transcription	Fetal Heart	heart
9	chr10:18519600-18522600	Weak transcription	Colon Smooth Muscle	Colon
10	chr10:18520800-18525600	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr10:18521800-18523400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr10:18522000-18522600	Weak transcription	Left Ventricle	heart
13	chr10:18522000-18523600	Enhancers	Ovary	ovary
14	chr10:18522200-18522600	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr10:18522200-18523600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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